RNA–Protein interactions for RNA: ENST00000512557.5

SLC41A3-216, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2

Gene SLC41A3, Length 3,828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-216ENST00000512557 PDIK1LQ8N165 341 aa9.34□□□□□ -0.91
SLC41A3-216ENST00000512557 C12orf50Q8NA57 414 aaPredicted RBP9.34□□□□□ -0.91
SLC41A3-216ENST00000512557 CENPTQ96BT3 561 aa9.34□□□□□ -0.91
SLC41A3-216ENST00000512557 TACO1Q9BSH4 297 aaKnown RBP9.34□□□□□ -0.91
SLC41A3-216ENST00000512557 PDZD7Q9H5P4 517 aa9.34□□□□□ -0.91
SLC41A3-216ENST00000512557 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
SLC41A3-216ENST00000512557 COL11A1P12107 1806 aaPredicted RBP9.34□□□□□ -0.91
SLC41A3-216ENST00000512557 UNCXA6NJT0 531 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 SRRM3A6NNA2 597 aaPredicted RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 CHUKO15111 745 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 UBOX5O94941 541 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 LCP1P13796 627 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 APLP1P51693 650 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 CLDN10P78369 228 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 NBPF20Q3BBV1 942 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 SH3PXD2AQ5TCZ1 1133 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 RSPH3Q86UC2 560 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 CYP4X1Q8N118 509 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 WDTC1Q8N5D0 677 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 FAM71DQ8N9W8 422 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 C18orf25Q96B23 403 aaPredicted RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 NT5C1AQ9BXI3 368 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 XYLT2Q9H1B5 865 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 TSPAN16Q9UKR8 245 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 FAM47DPA6NHR8 397 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 E5RJQ4 531 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 B4GALT4O60513 344 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 RPSAP08865 295 aaKnown RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 GHRP10912 638 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 MSH2P43246 934 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 RAD23BP54727 409 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 ARL4CP56559 192 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 EIF3EP60228 445 aaKnown RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 MMRN1Q13201 1228 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 SPARCL1Q14515 664 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 GOLGA7BQ2TAP0 167 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 FAXCQ5TGI0 409 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 BSPRYQ5W0U4 402 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 CNPY4Q8N129 248 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 SGSM3Q96HU1 749 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 SLITRK1Q96PX8 696 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 ECT2Q9H8V3 914 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 CDHR5Q9HBB8 845 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 DDX56Q9NY93 547 aaKnown RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 PPEF2O14830 753 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 HCRTO43612 131 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 LIASO43766 372 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 ERBB2P04626 1255 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 GNAT1P11488 350 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 EIF4BP23588 611 aaKnown RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 CTGFP29279 349 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 CTCFP49711 727 aaPredicted RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 CACNB2Q08289 660 aaPredicted RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 FASTKD3Q14CZ7 662 aaKnown RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 TCEAL1Q15170 157 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 PAN2Q504Q3 1202 aaKnown RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 ZNF449Q6P9G9 518 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 C3orf62Q6ZUJ4 267 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 CCDC91Q7Z6B0 441 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 TMEM174Q8WUU8 243 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 ATXN2LQ8WWM7 1075 aaKnown RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 RXFP2Q8WXD0 754 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 TTC25Q96NG3 672 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 EIF2AQ9BY44 585 aaKnown RBP9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 KIF9Q9HAQ2 790 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 GOLGA2P5Q9HBQ8 144 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 AAASQ9NRG9 546 aa9.33□□□□□ -0.92
SLC41A3-216ENST00000512557 CPP00450 1065 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 ASGR1P07306 291 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 PAEPP09466 180 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 RBP3P10745 1247 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 MCF2P10911 925 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 MIPP30301 263 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 SSTR1P30872 391 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 SPRED3Q2MJR0 410 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 CDCA2Q69YH5 1023 aaPredicted RBP9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 GLT1D1Q96MS3 346 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 C16orf70Q9BSU1 422 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 B3GNT5Q9BYG0 378 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 CXCL16Q9H2A7 254 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 NXF3Q9H4D5 531 aaKnown RBP9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 CYTH4Q9UIA0 394 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 ARL2BPQ9Y2Y0 163 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 DNALI1O14645 258 aaPredicted RBP9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 LSM8O95777 96 aaKnown RBP9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 VCPP55072 806 aaKnown RBP9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 TAP1Q03518 808 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 IFRD2Q12894 506 aaPredicted RBP9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 KCNA10Q16322 511 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 PKN2Q16513 984 aaKnown RBP9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 NPNTQ6UXI9 565 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 FUKQ8N0W3 1084 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 SLC4A11Q8NBS3 891 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 NETO2Q8NC67 525 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 SPATA18Q8TC71 538 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 SNX25Q9H3E2 840 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 KDM4CQ9H3R0 1056 aa9.32□□□□□ -0.92
SLC41A3-216ENST00000512557 DCTN4Q9UJW0 460 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms