RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 COMMD8Q9NX08 183 aa28.34■■■□□ 2.13
SNF8-208ENST00000510195 WNT6Q9Y6F9 365 aa28.34■■■□□ 2.13
SNF8-208ENST00000510195 HELZP42694 1942 aaKnown RBP28.33■■■□□ 2.13
SNF8-208ENST00000510195 PRR5-ARHGAP8B1AHC4 643 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 NFATC1O95644 943 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 OAS1P00973 400 aaKnown RBP28.33■■■□□ 2.13
SNF8-208ENST00000510195 CACNA2D1P54289 1103 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 CDH8P55286 799 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 DLG4P78352 724 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 ARHGAP8P85298 464 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 DMWDQ09019 674 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 DPYDQ12882 1025 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 TAF10Q12962 218 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 CEP135Q66GS9 1140 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 SV2AQ7L0J3 742 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 CD101Q93033 1021 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 TMEM30AQ9NV96 361 aa28.33■■■□□ 2.13
SNF8-208ENST00000510195 LEFTY2O00292 366 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 EGFP01133 1207 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 TGM1P22735 817 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 YWHAQP27348 245 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 LMNB2Q03252 620 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 KRBA2Q6ZNG9 492 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 PRR23BQ6ZRT6 265 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 UNC93AQ86WB7 457 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 DDX42Q86XP3 938 aaKnown RBP eCLIP28.32■■■□□ 2.12
SNF8-208ENST00000510195 CAMKK1Q8N5S9 505 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 TTC16Q8NEE8 873 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 CCDC34Q96HJ3 373 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 RNF38Q9H0F5 515 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 FBRSL1Q9HCM7 1045 aaKnown RBP28.32■■■□□ 2.12
SNF8-208ENST00000510195 IL37Q9NZH6 218 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 SLC8A2Q9UPR5 921 aa28.32■■■□□ 2.12
SNF8-208ENST00000510195 CLDN5O00501 218 aa28.31■■■□□ 2.12
SNF8-208ENST00000510195 SLC9A3R1O14745 358 aaPredicted RBP28.31■■■□□ 2.12
SNF8-208ENST00000510195 CLSTN1O94985 981 aa28.31■■■□□ 2.12
SNF8-208ENST00000510195 TRIM21P19474 475 aaKnown RBP28.31■■■□□ 2.12
SNF8-208ENST00000510195 ZXDBP98169 803 aa28.31■■■□□ 2.12
SNF8-208ENST00000510195 HEATR6Q6AI08 1181 aaKnown RBP28.31■■■□□ 2.12
SNF8-208ENST00000510195 INTS8Q75QN2 995 aaKnown RBP28.31■■■□□ 2.12
SNF8-208ENST00000510195 FAM35AQ86V20 835 aa28.31■■■□□ 2.12
SNF8-208ENST00000510195 CRYBG2Q8N1P7 616 aa28.31■■■□□ 2.12
SNF8-208ENST00000510195 GUF1Q8N442 669 aaKnown RBP28.31■■■□□ 2.12
SNF8-208ENST00000510195 SMARCD1Q96GM5 515 aa28.31■■■□□ 2.12
SNF8-208ENST00000510195 LINC00597Q9H2U6 94 aa28.31■■■□□ 2.12
SNF8-208ENST00000510195 DMAP1Q9NPF5 467 aaPredicted RBP28.31■■■□□ 2.12
SNF8-208ENST00000510195 RNF40O75150 1001 aa28.3■■■□□ 2.12
SNF8-208ENST00000510195 ASS1P00966 412 aaKnown RBP28.3■■■□□ 2.12
SNF8-208ENST00000510195 RPL13P26373 211 aaKnown RBP28.3■■■□□ 2.12
SNF8-208ENST00000510195 VAMP7P51809 220 aa28.3■■■□□ 2.12
SNF8-208ENST00000510195 SNX30Q5VWJ9 437 aa28.3■■■□□ 2.12
SNF8-208ENST00000510195 PAQR9Q6ZVX9 377 aa28.3■■■□□ 2.12
SNF8-208ENST00000510195 MED10Q9BTT4 135 aa28.3■■■□□ 2.12
SNF8-208ENST00000510195 TNFRSF10BO14763 440 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 ZNF202O95125 648 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 ABL1P00519 1130 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 PRR29P0C7W0 189 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 NR2F2P24468 414 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 RAP1GAPP47736 663 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 PKN3Q6P5Z2 889 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 SCARA5Q6ZMJ2 495 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 DGLUCYQ7Z3D6 616 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 FBXO32Q969P5 355 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 CHAMP1Q96JM3 812 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 KCNK16Q96T55 309 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 SDCBP2Q9H190 292 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 CPQQ9Y646 472 aa28.29■■■□□ 2.12
SNF8-208ENST00000510195 FAM92AA1XBS5 289 aa28.28■■■□□ 2.12
SNF8-208ENST00000510195 FOXD2O60548 495 aaPredicted RBP28.28■■■□□ 2.12
SNF8-208ENST00000510195 TUBP50607 506 aa28.28■■■□□ 2.12
SNF8-208ENST00000510195 MCCD1P59942 119 aaPredicted RBP28.28■■■□□ 2.12
SNF8-208ENST00000510195 RSPO4Q2I0M5 234 aaPredicted RBP28.28■■■□□ 2.12
SNF8-208ENST00000510195 C1orf220Q5T0J3 134 aa28.28■■■□□ 2.12
SNF8-208ENST00000510195 SYT13Q7L8C5 426 aa28.28■■■□□ 2.12
SNF8-208ENST00000510195 ADGRG2Q8IZP9 1017 aa28.28■■■□□ 2.12
SNF8-208ENST00000510195 FUKQ8N0W3 1084 aa28.28■■■□□ 2.12
SNF8-208ENST00000510195 ACDQ96AP0 544 aa28.28■■■□□ 2.12
SNF8-208ENST00000510195 IMPG2Q9BZV3 1241 aa28.28■■■□□ 2.12
SNF8-208ENST00000510195 USP18Q9UMW8 372 aa28.28■■■□□ 2.12
SNF8-208ENST00000510195 GTF3C3Q9Y5Q9 886 aa28.28■■■□□ 2.12
SNF8-208ENST00000510195 ATG2BQ96BY7 2078 aa28.27■■■□□ 2.12
SNF8-208ENST00000510195 AKAP3O75969 853 aa28.27■■■□□ 2.12
SNF8-208ENST00000510195 HLA-DRAP01903 254 aa28.27■■■□□ 2.12
SNF8-208ENST00000510195 PIK3CAP42336 1068 aa28.27■■■□□ 2.12
SNF8-208ENST00000510195 LPAL2Q16609 132 aa28.27■■■□□ 2.12
SNF8-208ENST00000510195 CEP68Q76N32 757 aa28.27■■■□□ 2.12
SNF8-208ENST00000510195 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.27■■■□□ 2.12
SNF8-208ENST00000510195 ACOT1Q86TX2 421 aa28.27■■■□□ 2.12
SNF8-208ENST00000510195 CSNK1G1Q9HCP0 422 aa28.27■■■□□ 2.12
SNF8-208ENST00000510195 TBC1D14Q9P2M4 693 aa28.27■■■□□ 2.12
SNF8-208ENST00000510195 AP1G2O75843 785 aa28.26■■■□□ 2.11
SNF8-208ENST00000510195 KRT13P13646 458 aa28.26■■■□□ 2.11
SNF8-208ENST00000510195 PSMC2P35998 433 aaKnown RBP28.26■■■□□ 2.11
SNF8-208ENST00000510195 ASPAP45381 313 aa28.26■■■□□ 2.11
SNF8-208ENST00000510195 NDST1P52848 882 aa28.26■■■□□ 2.11
SNF8-208ENST00000510195 SLC5A3P53794 718 aa28.26■■■□□ 2.11
SNF8-208ENST00000510195 IFRD2Q12894 506 aaPredicted RBP28.26■■■□□ 2.11
SNF8-208ENST00000510195 FILIP1Q7Z7B0 1213 aa28.26■■■□□ 2.11
SNF8-208ENST00000510195 GAB3Q8WWW8 586 aa28.26■■■□□ 2.11
SNF8-208ENST00000510195 DUSP9Q99956 384 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms