RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 TRMT13Q9NUP7 481 aaKnown RBP5.56□□□□□ -1.52
NEK1-204ENST00000509912 PCDHB6Q9Y5E3 794 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 AKR1B10O60218 316 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 TADA3O75528 432 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 AGFG1P52594 562 aaKnown RBP5.56□□□□□ -1.52
NEK1-204ENST00000509912 RRP1P56182 461 aaKnown RBP5.56□□□□□ -1.52
NEK1-204ENST00000509912 MRPS9P82933 396 aaKnown RBP5.56□□□□□ -1.52
NEK1-204ENST00000509912 PFKPQ01813 784 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 CD69Q07108 199 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 DBPQ10586 325 aaPredicted RBP5.56□□□□□ -1.52
NEK1-204ENST00000509912 APBB2Q92870 758 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 HRASLS5Q96KN8 279 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 ALPK1Q96QP1 1244 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 KRT23Q9C075 422 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 UNKQ9C0B0 810 aaKnown RBP5.56□□□□□ -1.52
NEK1-204ENST00000509912 ACAD9Q9H845 621 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 SACM1LQ9NTJ5 587 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 FLRT1Q9NZU1 646 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 LRFN1Q9P244 771 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 TMEM59LQ9UK28 342 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 COG5Q9UP83 839 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 COL1A2P08123 1366 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 ZNF536O15090 1300 aa5.56□□□□□ -1.52
NEK1-204ENST00000509912 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 A0A1W2PQ45 241 aaPredicted RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 A0A1W2PQY0 241 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 PRAMEF4O60810 478 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 OPHN1O60890 802 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 DTNBO60941 627 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 MED26O95402 600 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 HNRNPLP14866 589 aaKnown RBP eCLIP5.55□□□□□ -1.52
NEK1-204ENST00000509912 PDIA3P30101 505 aaKnown RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 NCKAP1LP55160 1127 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 CYP27A1Q02318 531 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 ICA1Q05084 483 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 RAB3GAP1Q15042 981 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 DUSP28Q4G0W2 176 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 MCMDC2Q4G0Z9 681 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 TIGD7Q6NT04 549 aaPredicted RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 CYP26C1Q6V0L0 522 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 LIPIQ6XZB0 460 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 RASGRP2Q7LDG7 609 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 TRPV1Q8NER1 839 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 LRRC46Q96FV0 321 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 LIN37Q96GY3 246 aaPredicted RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 GUCD1Q96NT3 240 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 NACC1Q96RE7 527 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 SENP7Q9BQF6 1050 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 C1orf43Q9BWL3 253 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 IL23AQ9NPF7 189 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 ATP11BQ9Y2G3 1177 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 LRCH1Q9Y2L9 728 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 RPS6KL1Q9Y6S9 549 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 KDM3AQ9Y4C1 1321 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 IDH1O75874 414 aaKnown RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 RHOBTB3O94955 611 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 TNFRSF6BO95407 300 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 NDST3O95803 873 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 CALM1P0DP23 149 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 CALM2P0DP24 149 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 CALM3P0DP25 149 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 SLC7A1P30825 629 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 SLC6A9P48067 706 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 EPHA5P54756 1037 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 GEMIN4P57678 1058 aaKnown RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 EVCP57679 992 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 TARDBPQ13148 414 aaKnown RBP eCLIP5.55□□□□□ -1.524e-6■■■■□ 22.3
NEK1-204ENST00000509912 DOC2BQ14184 412 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 KHDC1Q4VXA5 237 aaKnown RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 KIAA1841Q6NSI8 718 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 DEPTORQ8TB45 409 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 FRAT1Q92837 279 aaPredicted RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 TNPO1Q92973 898 aaKnown RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 KATNAL1Q9BW62 490 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.55□□□□□ -1.52
NEK1-204ENST00000509912 ADAMTS6Q9UKP5 1117 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 NFASCO94856 1347 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 A0A1W2PRG0 241 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 TMEM233B4DJY2 109 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 GNAQP50148 359 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 STAT5BP51692 787 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 RTL10Q7L3V2 364 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 TMPRSS7Q7RTY8 843 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 DPP9Q86TI2 863 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 CABP7Q86V35 215 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 MIGA1Q8NAN2 632 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 USP38Q8NB14 1042 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 ZNF527Q8NB42 609 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 ACER1Q8TDN7 264 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 TBC1D20Q96BZ9 403 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 DMRTA2Q96SC8 542 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 RIOX1Q9H6W3 641 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 GTF2A1LQ9UNN4 478 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 TNNQ9UQP3 1299 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 SIP14410 1827 aa5.55□□□□□ -1.52
NEK1-204ENST00000509912 A0A0A6YYK5 440 aaPredicted RBP5.54□□□□□ -1.52
NEK1-204ENST00000509912 C5orf67F2Z3F1 127 aa5.54□□□□□ -1.52
NEK1-204ENST00000509912 COBLO75128 1261 aa5.54□□□□□ -1.52
NEK1-204ENST00000509912 SNAI1O95863 264 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms