RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 MTAPQ13126 283 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 NR1H3Q13133 447 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 ANKRD40Q6AI12 368 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 SLC2A14Q8TDB8 520 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 SH3RF2Q8TEC5 729 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 OSCP1Q8WVF1 389 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 METTL14Q9HCE5 456 aaKnown RBP19.78■□□□□ 0.76
UBE3D-207ENST00000509102 FAM49BQ9NUQ9 324 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 RAB20Q9NX57 234 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 CHMP5Q9NZZ3 219 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 GCNT4Q9P109 453 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 BICDL2A1A5D9 508 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 PRR23AA6NEV1 266 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 CHRNB1P11230 501 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 CCDC130P13994 396 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 ANP32AP39687 249 aaKnown RBP19.77■□□□□ 0.76
UBE3D-207ENST00000509102 SLC5A3P53794 718 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 NRLP54845 237 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 GRSF1Q12849 480 aaKnown RBP eCLIP19.77■□□□□ 0.76
UBE3D-207ENST00000509102 USP4Q13107 963 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 ORC1Q13415 861 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 FZD5Q13467 585 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 ZNF77Q15935 545 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 ISM2Q6H9L7 571 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 DDX42Q86XP3 938 aaKnown RBP eCLIP19.77■□□□□ 0.76
UBE3D-207ENST00000509102 FUKQ8N0W3 1084 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 SYNPOQ8N3V7 929 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 ATRIPQ8WXE1 791 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 SLC22A12Q96S37 553 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 KCNK16Q96T55 309 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 FAM126AQ9BYI3 521 aaPredicted RBP19.77■□□□□ 0.76
UBE3D-207ENST00000509102 FBXO44Q9H4M3 255 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 FAM124BQ9H5Z6 455 aaPredicted RBP19.77■□□□□ 0.76
UBE3D-207ENST00000509102 APOBEC3GQ9HC16 384 aaKnown RBP19.77■□□□□ 0.76
UBE3D-207ENST00000509102 MAN1B1Q9UKM7 699 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 R4GN57 208 aa19.77■□□□□ 0.76
UBE3D-207ENST00000509102 LMNAP02545 664 aaKnown RBP19.76■□□□□ 0.75
UBE3D-207ENST00000509102 TCF3P15923 654 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 ADORA2BP29275 332 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 MCCD1P59942 119 aaPredicted RBP19.76■□□□□ 0.75
UBE3D-207ENST00000509102 PON2Q15165 354 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 TRIM68Q6AZZ1 485 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 KLHL10Q6JEL2 608 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 MAMSTRQ6ZN01 415 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 ZNF687Q8N1G0 1237 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 CEP63Q96MT8 703 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 NACA2Q9H009 215 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 TMEM30AQ9NV96 361 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 HMGXB4Q9UGU5 601 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 PCDHGA2Q9Y5H1 932 aa19.76■□□□□ 0.75
UBE3D-207ENST00000509102 GREB1Q4ZG55 1949 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 TRIM49BA6NDI0 452 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 SLC9A3R1O14745 358 aaPredicted RBP19.75■□□□□ 0.75
UBE3D-207ENST00000509102 CILPO75339 1184 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 NFATC1O95644 943 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 MBL2P11226 248 aaPredicted RBP19.75■□□□□ 0.75
UBE3D-207ENST00000509102 MAP3K7CLP57077 242 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 UBE2HP62256 183 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 YWHAEP62258 255 aaKnown RBP19.75■□□□□ 0.75
UBE3D-207ENST00000509102 SLC7A9P82251 487 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 CETN1Q12798 172 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 CCDC40Q4G0X9 1142 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 TXNDC11Q6PKC3 985 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 PAQR9Q6ZVX9 377 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 ASCL5Q7RTU5 278 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 ZC3H3Q8IXZ2 948 aaKnown RBP19.75■□□□□ 0.75
UBE3D-207ENST00000509102 MAML2Q8IZL2 1156 aaPredicted RBP19.75■□□□□ 0.75
UBE3D-207ENST00000509102 SPEM1Q8N4L4 309 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 KIAA1958Q8N8K9 716 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 C12orf29Q8N999 325 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 CYFIP2Q96F07 1278 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 HNRNPABQ99729 332 aaKnown RBP19.75■□□□□ 0.75
UBE3D-207ENST00000509102 HPS4Q9NQG7 708 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 PRMT8Q9NR22 394 aaPredicted RBP19.75■□□□□ 0.75
UBE3D-207ENST00000509102 ZSCAN32Q9NX65 697 aa19.75■□□□□ 0.75
UBE3D-207ENST00000509102 PATJQ8NI35 1801 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 LEFTY2O00292 366 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 GADD45BO75293 160 aaPredicted RBP19.74■□□□□ 0.75
UBE3D-207ENST00000509102 ARSAP15289 507 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 CXCL12P48061 93 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 PMS1P54277 932 aaKnown RBP19.74■□□□□ 0.75
UBE3D-207ENST00000509102 SLC8A3P57103 927 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 HECTD3Q5T447 861 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 ECT2Q9H8V3 914 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 CSNK1G1Q9HCP0 422 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 CPQQ9Y646 472 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 WNT6Q9Y6F9 365 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 CACNA1IQ9P0X4 2223 aa19.74■□□□□ 0.75
UBE3D-207ENST00000509102 TNFRSF10BO14763 440 aa19.73■□□□□ 0.75
UBE3D-207ENST00000509102 OAS1P00973 400 aaKnown RBP19.73■□□□□ 0.75
UBE3D-207ENST00000509102 TUBP50607 506 aa19.73■□□□□ 0.75
UBE3D-207ENST00000509102 ZNF394Q53GI3 561 aa19.73■□□□□ 0.75
UBE3D-207ENST00000509102 FOXR2Q6PJQ5 311 aa19.73■□□□□ 0.75
UBE3D-207ENST00000509102 FILIP1Q7Z7B0 1213 aa19.73■□□□□ 0.75
UBE3D-207ENST00000509102 SCAMP5Q8TAC9 235 aa19.73■□□□□ 0.75
UBE3D-207ENST00000509102 NELFBQ8WX92 580 aa19.73■□□□□ 0.75
UBE3D-207ENST00000509102 SEMA4DQ92854 862 aa19.73■□□□□ 0.75
UBE3D-207ENST00000509102 HEXIM2Q96MH2 286 aaKnown RBP19.73■□□□□ 0.75
UBE3D-207ENST00000509102 SMOQ99835 787 aa19.73■□□□□ 0.75
UBE3D-207ENST00000509102 PNPLA8Q9NP80 782 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms