RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 MLF2Q15773 248 aaPredicted RBP19.24■□□□□ 0.67
CLDND1-220ENST00000508902 SLC44A4Q53GD3 710 aa19.24■□□□□ 0.67
CLDND1-220ENST00000508902 CCDC183Q5T5S1 534 aa19.24■□□□□ 0.67
CLDND1-220ENST00000508902 ZNF687Q8N1G0 1237 aa19.24■□□□□ 0.67
CLDND1-220ENST00000508902 FLCNQ8NFG4 579 aa19.24■□□□□ 0.67
CLDND1-220ENST00000508902 DEPDC1BQ8WUY9 529 aa19.24■□□□□ 0.67
CLDND1-220ENST00000508902 TRMT61BQ9BVS5 477 aaKnown RBP19.24■□□□□ 0.67
CLDND1-220ENST00000508902 SIX2Q9NPC8 291 aa19.24■□□□□ 0.67
CLDND1-220ENST00000508902 OBP2AQ9NY56 170 aa19.24■□□□□ 0.67
CLDND1-220ENST00000508902 GMIPQ9P107 970 aa19.24■□□□□ 0.67
CLDND1-220ENST00000508902 OTOL1A6NHN0 477 aaPredicted RBP19.23■□□□□ 0.67
CLDND1-220ENST00000508902 FGFR1OPO95684 399 aaKnown RBP19.23■□□□□ 0.67
CLDND1-220ENST00000508902 STARD6P59095 220 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 TNK2Q07912 1038 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 ZNF77Q15935 545 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 TRIM65Q6PJ69 517 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 PPM1KQ8N3J5 372 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 PRSS33Q8NF86 280 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 FBXO32Q969P5 355 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 HEXIM2Q96MH2 286 aaKnown RBP19.23■□□□□ 0.67
CLDND1-220ENST00000508902 DUSP16Q9BY84 665 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 HSD3B7Q9H2F3 369 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 FAM124BQ9H5Z6 455 aaPredicted RBP19.23■□□□□ 0.67
CLDND1-220ENST00000508902 HPS4Q9NQG7 708 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 OSER1Q9NX31 292 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 DLGAP2Q9P1A6 1054 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 VPS13AQ96RL7 3174 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 CACNA1IQ9P0X4 2223 aa19.23■□□□□ 0.67
CLDND1-220ENST00000508902 MYOFQ9NZM1 2061 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 O00370 1275 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 GABBR2O75899 941 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 AOC1P19801 751 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 TBXAS1P24557 533 aaPredicted RBP19.22■□□□□ 0.67
CLDND1-220ENST00000508902 YWHAQP27348 245 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 SOX9P48436 509 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 ZNF268Q14587 947 aaPredicted RBP19.22■□□□□ 0.67
CLDND1-220ENST00000508902 PKDCCQ504Y2 493 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 CDKAL1Q5VV42 579 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 TRIM68Q6AZZ1 485 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 ASTLQ6HA08 431 aaPredicted RBP19.22■□□□□ 0.67
CLDND1-220ENST00000508902 BPIFB1Q8TDL5 484 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 DNASE1L2Q92874 299 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 WBP2Q969T9 261 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 ZFRQ96KR1 1074 aaKnown RBP19.22■□□□□ 0.67
CLDND1-220ENST00000508902 BRD9Q9H8M2 597 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 NMUR1Q9HB89 426 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 TDP1Q9NUW8 608 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 TRPM5Q9NZQ8 1165 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 CHORDC1Q9UHD1 332 aaPredicted RBP19.22■□□□□ 0.67
CLDND1-220ENST00000508902 CNTN6Q9UQ52 1028 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 NFE2L3Q9Y4A8 694 aa19.22■□□□□ 0.67
CLDND1-220ENST00000508902 SOBPA7XYQ1 873 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 BECN2A8MW95 431 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 CHADO15335 359 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 CYP26A1O43174 497 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 AVPR1AP37288 418 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 MTIF2P46199 727 aaKnown RBP19.21■□□□□ 0.67
CLDND1-220ENST00000508902 GCNT1Q02742 428 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 FZD5Q13467 585 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 NCAPHQ15003 741 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 MAN2A1Q16706 1144 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 GOLGA7BQ2TAP0 167 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 TXNDC11Q6PKC3 985 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 TMEM270Q6UE05 265 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 TPRG1Q6ZUI0 275 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 BHLHA9Q7RTU4 235 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 CREBRFQ8IUR6 639 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 CELF5Q8N6W0 485 aaKnown RBP19.21■□□□□ 0.67
CLDND1-220ENST00000508902 TTC8Q8TAM2 541 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 ENOX1Q8TC92 643 aaKnown RBP19.21■□□□□ 0.67
CLDND1-220ENST00000508902 FAM83CQ9BQN1 747 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 CCSER2Q9H7U1 834 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 ACP6Q9NPH0 428 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 TRPV5Q9NQA5 729 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 GTSE1Q9NYZ3 720 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 TSPAN16Q9UKR8 245 aa19.21■□□□□ 0.67
CLDND1-220ENST00000508902 TRAV19A0A0A6YYK7 116 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 KCNJ18B7U540 433 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 ZNF263O14978 683 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 RTN3O95197 1032 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-220ENST00000508902 ARSAP15289 507 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 BRD2P25440 801 aaKnown RBP19.2■□□□□ 0.66
CLDND1-220ENST00000508902 TARSP26639 723 aaKnown RBP19.2■□□□□ 0.66
CLDND1-220ENST00000508902 PON1P27169 355 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 KIF11P52732 1056 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 KCNMA1Q12791 1236 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 KCNJ12Q14500 433 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 CT47A1Q5JQC4 288 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-220ENST00000508902 SNX30Q5VWJ9 437 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 SCD5Q86SK9 330 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 SUGP1Q8IWZ8 645 aaKnown RBP19.2■□□□□ 0.66
CLDND1-220ENST00000508902 CCDC105Q8IYK2 499 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 TTC39CQ8N584 583 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 RBBP8NLQ8NC74 664 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-220ENST00000508902 E2F7Q96AV8 911 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 TUBGCP2Q9BSJ2 902 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 FUCA2Q9BTY2 467 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 PNPLA8Q9NP80 782 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 DACH1Q9UI36 760 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 ARHGAP26Q9UNA1 814 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms