RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PCDHA1Q9Y5I3 950 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 CYSRT1A8MQ03 144 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 hCG_1984214I3L0E3 225 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 ZRANB2O95218 330 aaKnown RBP eCLIP5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 MYCLP12524 364 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 THBS4P35443 961 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 E2F1Q01094 437 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 AMOTQ4VCS5 1084 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 DEPDC1Q5TB30 811 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 CCDC181Q5TID7 509 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 OSCP1Q8WVF1 389 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 MOGAT1Q96PD6 335 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 MMS19Q96T76 1030 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 VPS33BQ9H267 617 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 DDX56Q9NY93 547 aaKnown RBP5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 SHOC2Q9UQ13 582 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 MRPS17Q9Y2R5 130 aaKnown RBP5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 PLEKHM1Q9Y4G2 1056 aa5.32□□□□□ -1.56
TRAPPC13-209ENST00000508304 TLR2O60603 784 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 UNC5CO95185 931 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 CRYABP02511 175 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 PSG1P11464 419 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 HDCP19113 662 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 AKAP5P24588 427 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 NEK2P51955 445 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 ZNF91Q05481 1191 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 PGS1Q32NB8 556 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 PCSK9Q8NBP7 692 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 OSR1Q8TAX0 266 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 MAP4K1Q92918 833 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 PRR25Q96S07 402 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 DPCDQ9BVM2 203 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 HIPK2Q9H2X6 1198 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 PNPOQ9NVS9 261 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 PI4KBQ9UBF8 816 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 HEY2Q9UBP5 337 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 ANKRD6Q9Y2G4 727 aa5.31□□□□□ -1.56
TRAPPC13-209ENST00000508304 H3BNX3 289 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 GTPBP1O00178 669 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 AP4M1O00189 453 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 CNOT3O75175 753 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 GRPP07492 148 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 POU2F2P09086 479 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 ADORA2AP29274 412 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 LRPAP1P30533 357 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 MAP2K6P52564 334 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 MYO1EQ12965 1108 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 PLEKHG6Q3KR16 790 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 UBAP2Q5T6F2 1119 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 CAND1Q86VP6 1230 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 SFTPA1Q8IWL2 248 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 PRR18Q8N4B5 295 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 MTFMTQ96DP5 389 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 CTAGE1Q96RT6 745 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 MAP3K14Q99558 947 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 NUP88Q99567 741 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 CXorf36Q9H7Y0 433 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 TMEM184CQ9NVA4 438 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 SQORQ9Y6N5 450 aa5.3□□□□□ -1.56
TRAPPC13-209ENST00000508304 H3BUI4 141 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 GCATO75600 419 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 FGAP02671 866 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 CYP19A1P11511 503 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 SOX8P57073 446 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 PSG6Q00889 435 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 LY6KQ17RY6 165 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 DPY19L3Q6ZPD9 716 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 IZUMO1Q8IYV9 350 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 ABRAQ8N0Z2 381 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 ZNF548Q8NEK5 533 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 BRIX1Q8TDN6 353 aaKnown RBP5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 JDP2Q8WYK2 163 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 RSPRY1Q96DX4 576 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 CCDC17Q96LX7 622 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 CAMK1GQ96NX5 476 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 PPP1R10Q96QC0 940 aaKnown RBP5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 TYW1Q9NV66 732 aaKnown RBP5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 XPR1Q9UBH6 696 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 IP6K2Q9UHH9 426 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 TCEAL9Q9UHQ7 104 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 PROCRQ9UNN8 238 aa5.29□□□□□ -1.56
TRAPPC13-209ENST00000508304 NOTCH4Q99466 2003 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 PARNO95453 639 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 VNN1O95497 513 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 PDGFRBP09619 1106 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 PF4V1P10720 104 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 ME1P48163 572 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 NKX6-1P78426 367 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 ID2Q02363 134 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 CFHR1Q03591 330 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 NPY5RQ15761 445 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 C4orf46Q504U0 113 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 ODR4Q5SWX8 454 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 CATIPQ7Z7H3 387 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 PIM3Q86V86 326 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 ZNF280BQ86YH2 543 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 MVB12AQ96EY5 273 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 CDK5RAP3Q96JB5 506 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 TCF7L1Q9HCS4 588 aa5.28□□□□□ -1.56
TRAPPC13-209ENST00000508304 SARS2Q9NP81 518 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms