RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 LOXL4Q96JB6 756 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 B3GNT5Q9BYG0 378 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 RNF38Q9H0F5 515 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 SMYD3Q9H7B4 428 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 SMPD4Q9NXE4 827 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 SERTAD1Q9UHV2 236 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 CPQQ9Y646 472 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 SDK1Q7Z5N4 2213 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 NCOR2Q9Y618 2525 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 SCAMP3O14828 347 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 KLRC4O43908 158 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 FOXD2O60548 495 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 APBB3O95704 486 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 OAS1P00973 400 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 CYP17A1P05093 508 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 ATICP31939 592 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 RAP1GAPP47736 663 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 PPP3CCP48454 512 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 CDH8P55286 799 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 SEC13P55735 322 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 DNM1Q05193 864 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 SF3A2Q15428 464 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 GAB4Q2WGN9 574 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 ZNF699Q32M78 642 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 AASDHQ4L235 1098 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 TDRD10Q5VZ19 366 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 SCARA5Q6ZMJ2 495 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 FILIP1Q7Z7B0 1213 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 CEP57L1Q8IYX8 460 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 ELMO3Q96BJ8 720 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 SLITRK1Q96PX8 696 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 THADAQ6YHU6 1953 aa12.28□□□□□ -0.44
HMGCS1-204ENST00000507293 ANTXRLA6NF34 631 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 LRRIQ3A6PVS8 624 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 ACTN4O43707 911 aaKnown RBP12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 MBL2P11226 248 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 YWHAQP27348 245 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 STK4Q13043 487 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 PLK5Q496M5 336 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 ZNF667Q5HYK9 610 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 PPM1JQ5JR12 505 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 ATL3Q6DD88 541 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 FAM35AQ86V20 835 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 NUP93Q8N1F7 819 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 C12orf50Q8NA57 414 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 KIAA0895Q8NCT3 520 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 GOLGA5Q8TBA6 731 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 PARD3BQ8TEW8 1205 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 USP33Q8TEY7 942 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 FBXO32Q969P5 355 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 PAGE5Q96GU1 130 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 MED10Q9BTT4 135 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 SDCBP2Q9H190 292 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 SMOC1Q9H4F8 434 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 VRTNQ9H8Y1 702 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 EXOC1Q9NV70 894 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 CFAP97Q9P2B7 532 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 CFAP45Q9UL16 551 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 ATP8B3O60423 1300 aa12.27□□□□□ -0.45
HMGCS1-204ENST00000507293 DNAH14Q0VDD8 3507 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 SPTBN2O15020 2390 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 K7EQS6 105 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 SLC9A3R1O14745 358 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 DCLK1O15075 740 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 RTN3O95197 1032 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 VNN1O95497 513 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 C4BPAP04003 597 aaKnown RBP12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 ADRB1P08588 477 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 SLFN14P0C7P3 912 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 ZNF806P0C7X5 589 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 KCNA4P22459 653 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 MPLP40238 635 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 DGKEP52429 567 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 AP3M2P53677 418 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 DLG4P78352 724 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 NCOA4Q13772 614 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 DHCR24Q15392 516 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 KMT5BQ4FZB7 885 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 C2orf27AQ580R0 203 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 KIAA1958Q8N8K9 716 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 SPRYD3Q8NCJ5 442 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 PDZD8Q8NEN9 1154 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 TSTD1Q8NFU3 115 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 CCDC26Q8TAB7 109 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 ZC3H10Q96K80 434 aaKnown RBP12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 CNTNAP3BQ96NU0 1288 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 KCNK16Q96T55 309 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 CNTNAP3Q9BZ76 1288 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 DUSP15Q9H1R2 295 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 RXFP3Q9NSD7 469 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 DMAC2Q9NW81 257 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 EBF1Q9UH73 591 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 RCOR1Q9UKL0 485 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 PCDHGA5Q9Y5G8 931 aa12.26□□□□□ -0.45
HMGCS1-204ENST00000507293 TNRC6BQ9UPQ9 1833 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 PLXND1Q9Y4D7 1925 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 COCHO43405 550 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 PFKFB1P16118 471 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 LIMK1P53667 647 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms