RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 BIRC5O15392 142 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 KRT37O76014 449 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 UQCRBP14927 111 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 CPOXP36551 454 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 CPA2P48052 419 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 BST1Q10588 318 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 KBTBD12Q3ZCT8 623 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 LGSNQ5TDP6 509 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 DPY19L2Q6NUT2 758 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 DCUN1D2Q6PH85 259 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 IL31RAQ8NI17 732 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 FBXO27Q8NI29 283 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 NAT14Q8WUY8 206 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 PKD2L1Q9P0L9 805 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 COL20A1Q9P218 1284 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 ARHGAP28Q9P2N2 729 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 PCDHAC2Q9Y5I4 1007 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 ANKRD31Q8N7Z5 1873 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 A0A088AWK7 358 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 TCRBV7S3A2A0A539 114 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 ICAM1P05362 532 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 SNRPAP09012 282 aaKnown RBP18.51■□□□□ 0.55
NUP54-205ENST00000507257 TNNI1P19237 187 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 ELK3P41970 407 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 IRX4P78413 519 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 MRPS9P82933 396 aaKnown RBP18.51■□□□□ 0.55
NUP54-205ENST00000507257 MED21Q13503 144 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 ANO5Q75V66 913 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 ARCQ7LC44 396 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 PRPF39Q86UA1 669 aaKnown RBP18.51■□□□□ 0.55
NUP54-205ENST00000507257 LCA5Q86VQ0 697 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 MCF2L2Q86YR7 1114 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 CRLF3Q8IUI8 442 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 MCPH1Q8NEM0 835 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 FNIP1Q8TF40 1166 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 CHMP2BQ9UQN3 213 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 G3V3G9 751 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 TRDMT1O14717 391 aaKnown RBP18.5■□□□□ 0.55
NUP54-205ENST00000507257 PEX1O43933 1283 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 SLC25A11Q02978 314 aaKnown RBP18.5■□□□□ 0.55
NUP54-205ENST00000507257 BTKQ06187 659 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 HIC1Q14526 733 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 TBC1D10BQ4KMP7 808 aaPredicted RBP18.5■□□□□ 0.55
NUP54-205ENST00000507257 EFHC1Q5JVL4 640 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 DCAF8Q5TAQ9 597 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 SPOPLQ6IQ16 392 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 ARID3BQ8IVW6 561 aaPredicted RBP18.5■□□□□ 0.55
NUP54-205ENST00000507257 TMEM35BQ8NCS4 154 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 ACER1Q8TDN7 264 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 BTBD9Q96Q07 612 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 TTC1Q99614 292 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 SH2D3AQ9BRG2 576 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 EBF3Q9H4W6 596 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 PDLIM7Q9NR12 457 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 ZBTB21Q9ULJ3 1066 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 AGTPBP1Q9UPW5 1226 aa18.5■□□□□ 0.55
NUP54-205ENST00000507257 HBS1LQ9Y450 684 aaKnown RBP18.5■□□□□ 0.55
NUP54-205ENST00000507257 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 SPDYE2BA6NHP3 402 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 SDR42E2A6NKP2 422 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 KBTBD13C9JR72 458 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 APOC4-APOC2K7ER74 178 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 CASQ2O14958 399 aaPredicted RBP18.49■□□□□ 0.55
NUP54-205ENST00000507257 CHADO15335 359 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 CST8O60676 142 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 DKC1O60832 514 aaKnown RBP eCLIP18.49■□□□□ 0.55
NUP54-205ENST00000507257 APOC2P02655 101 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 SPDYE6P0CI01 402 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 TMPRSS15P98073 1019 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 DPYSL3Q14195 570 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 VPS72Q15906 364 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 SPDYE2Q495Y8 402 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 DACT2Q5SW24 774 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 TAS1R3Q7RTX0 852 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 RASSF3Q86WH2 238 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 IGDCC3Q8IVU1 814 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 LBHD1Q9BQE6 289 aaPredicted RBP18.49■□□□□ 0.55
NUP54-205ENST00000507257 SIP14410 1827 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 BTBD19C9JJ37 291 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 POLRMTO00411 1230 aaKnown RBP18.49■□□□□ 0.55
NUP54-205ENST00000507257 BAG2O95816 211 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 PIGRP01833 764 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 PRKCHP24723 683 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 MAP7Q14244 749 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 KCNJ11Q14654 390 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 HADHQ16836 314 aaKnown RBP18.49■□□□□ 0.55
NUP54-205ENST00000507257 PGM2L1Q6PCE3 622 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 CDHR3Q6ZTQ4 885 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 NCAPG2Q86XI2 1143 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 NLRP4Q96MN2 994 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 KLHL4Q9C0H6 718 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 IRAK4Q9NWZ3 460 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 PCDHGC3Q9UN70 934 aa18.49■□□□□ 0.55
NUP54-205ENST00000507257 TRIM49D1C9J1S8 452 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 PIAS1O75925 651 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 KLHL2O95198 593 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 WEE2P0C1S8 567 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 EIF4BP23588 611 aaKnown RBP18.48■□□□□ 0.55
NUP54-205ENST00000507257 KDELR1P24390 212 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 PTGER2P43116 358 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms