RNA–Protein interactions for RNA: ENST00000506891.1

TTC39B-205, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-205ENST00000506891 IL37Q9NZH6 218 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 ARHGAP26Q9UNA1 814 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 PCDHGA2Q9Y5H1 932 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 FAM92AA1XBS5 289 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 PRR23AA6NEV1 266 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 CILPO75339 1184 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 CLSTN1O94985 981 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 LMNAP02545 664 aaKnown RBP12.85□□□□□ -0.35
TTC39B-205ENST00000506891 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
TTC39B-205ENST00000506891 YWHAQP27348 245 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
TTC39B-205ENST00000506891 TUBP50607 506 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 CCR3P51677 355 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 NDST1P52848 882 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 SLC7A9P82251 487 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 CSTF1Q05048 431 aaKnown RBP12.85□□□□□ -0.35
TTC39B-205ENST00000506891 TAF10Q12962 218 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 MTAPQ13126 283 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 NR1H3Q13133 447 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 TCERG1LQ5VWI1 586 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 SNX30Q5VWJ9 437 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 PAQR9Q6ZVX9 377 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 ASCL5Q7RTU5 278 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 SPEM1Q8N4L4 309 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 ARL14EPQ8N8R7 260 aaPredicted RBP12.85□□□□□ -0.35
TTC39B-205ENST00000506891 OSCP1Q8WVF1 389 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 ATRIPQ8WXE1 791 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 ERCC4Q92889 916 aaPredicted RBP12.85□□□□□ -0.35
TTC39B-205ENST00000506891 ZFYVE19Q96K21 471 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 HNRNPABQ99729 332 aaKnown RBP12.85□□□□□ -0.35
TTC39B-205ENST00000506891 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
TTC39B-205ENST00000506891 MED10Q9BTT4 135 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 ZNF518BQ9C0D4 1074 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 SMG9Q9H0W8 520 aaKnown RBP12.85□□□□□ -0.35
TTC39B-205ENST00000506891 SDCBP2Q9H190 292 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 FBXO44Q9H4M3 255 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 TRPC7Q9HCX4 862 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 PRMT8Q9NR22 394 aaPredicted RBP12.85□□□□□ -0.35
TTC39B-205ENST00000506891 ZSCAN32Q9NX65 697 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 KIAA1257Q9ULG3 409 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 CCL26Q9Y258 94 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 GREB1Q4ZG55 1949 aa12.85□□□□□ -0.35
TTC39B-205ENST00000506891 TRIM49BA6NDI0 452 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 CLDN5O00501 218 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 TRDMT1O14717 391 aaKnown RBP12.84□□□□□ -0.35
TTC39B-205ENST00000506891 CKMP06732 381 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 CXCL12P48061 93 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 FMO5P49326 533 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 USP46P62068 366 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 TNK2Q07912 1038 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 GRSF1Q12849 480 aaKnown RBP eCLIP12.84□□□□□ -0.35
TTC39B-205ENST00000506891 MTF1Q14872 753 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 ZNF77Q15935 545 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 CCDC40Q4G0X9 1142 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 DCAF17Q5H9S7 520 aaPredicted RBP12.84□□□□□ -0.35
TTC39B-205ENST00000506891 ACOT1Q86TX2 421 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 FAM35AQ86V20 835 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 TRIM59Q8IWR1 403 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 FUKQ8N0W3 1084 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 ZBTB44Q8NCP5 570 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 STKLD1Q8NE28 680 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 UBXN6Q9BZV1 441 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 NUP62CLQ9H1M0 184 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 APOBEC3GQ9HC16 384 aaKnown RBP12.84□□□□□ -0.35
TTC39B-205ENST00000506891 HPS4Q9NQG7 708 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 DUS2Q9NX74 493 aaKnown RBP12.84□□□□□ -0.35
TTC39B-205ENST00000506891 KMT2EQ8IZD2 1858 aa12.84□□□□□ -0.35
TTC39B-205ENST00000506891 GTPBP10A4D1E9 387 aaKnown RBP12.83□□□□□ -0.36
TTC39B-205ENST00000506891 C2orf78A6NCI8 922 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 SLC9A3R1O14745 358 aaPredicted RBP12.83□□□□□ -0.36
TTC39B-205ENST00000506891 TNFRSF10BO14763 440 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 PAPSS2O95340 614 aaPredicted RBP12.83□□□□□ -0.36
TTC39B-205ENST00000506891 OLFM2O95897 454 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 DRD1P21728 446 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 RAP1GAPP47736 663 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 SOX9P48436 509 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 CACNA2D1P54289 1103 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 SLC8A3P57103 927 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 GCNT1Q02742 428 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 CBWD6Q4V339 395 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 TMEM196Q5HYL7 178 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 SPOPLQ6IQ16 392 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 KLHL10Q6JEL2 608 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 TXNDC11Q6PKC3 985 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 DDX42Q86XP3 938 aaKnown RBP eCLIP12.83□□□□□ -0.36
TTC39B-205ENST00000506891 FAM114A1Q8IWE2 563 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 CPA6Q8N4T0 437 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 ZNF276Q8N554 614 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 CCDC26Q8TAB7 109 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 SH3RF2Q8TEC5 729 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 ATP2A3Q93084 1043 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 KCNK16Q96T55 309 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 EBF3Q9H4W6 596 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 ECT2Q9H8V3 914 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 LMBRD1Q9NUN5 540 aa12.83□□□□□ -0.36
TTC39B-205ENST00000506891 OBSL1O75147 1896 aa12.82□□□□□ -0.36
TTC39B-205ENST00000506891 ZNF638Q14966 1978 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms