RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 CCNG2Q16589 344 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 TIGD5Q53EQ6 642 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 BOLA3Q53S33 107 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 EFHC1Q5JVL4 640 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 ZFYVE27Q5T4F4 411 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 DRICH1Q6PGQ1 229 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 CCDC137Q6PK04 289 aaKnown RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 GLB1LQ6UWU2 654 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 CD300LGQ6UXG3 332 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 SPOCD1Q6ZMY3 1216 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 SND1Q7KZF4 910 aaKnown RBP eCLIP8.45□□□□□ -1.062e-9■■■■■ 35.3
COL4A5-208ENST00000505728 JAMLQ86YT9 394 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 CCDC50Q8IVM0 306 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 FAM126BQ8IXS8 530 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 CCDC105Q8IYK2 499 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 ARFGAP1Q8N6T3 406 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 CMASQ8NFW8 434 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 ATL2Q8NHH9 583 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 URGCPQ8TCY9 931 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 SLC2A14Q8TDB8 520 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 GRK7Q8WTQ7 553 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 IFT81Q8WYA0 676 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 APBB2Q92870 758 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 KHSRPQ92945 711 aaKnown RBP eCLIP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 RNF25Q96BH1 459 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 SLITRK1Q96PX8 696 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 SYT15Q9BQS2 421 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 ACBD6Q9BR61 282 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 FAM129AQ9BZQ8 928 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 DDX43Q9NXZ2 648 aaKnown RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 NFU1Q9UMS0 254 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 DRG1Q9Y295 367 aaKnown RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 TTC3P53804 2025 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 CHD9Q3L8U1 2897 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 TET1Q8NFU7 2136 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 hCG_1818297A0A087WSY0 165 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 TCRBV7S2A1N4TA0A589 114 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 TMEM189-UBE2V1I3L0A0 370 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 TULP2O00295 520 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 ENPP3O14638 875 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 HCRTO43612 131 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 LRCH4O75427 683 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 GABBR2O75899 941 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 B3GAT3O94766 335 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 ENDOD1O94919 500 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 FBXO21O94952 628 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 ECEL1O95672 775 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 FAM200BP0CF97 657 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 CCDC130P13994 396 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 NPR3P17342 541 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 KDELR1P24390 212 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 MIPP30301 263 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 SDC4P31431 198 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 GJC1P36383 396 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 CDKN2BP42772 138 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 PTPN9P43378 593 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 SLC25A11Q02978 314 aaKnown RBP8.44□□□□□ -1.06
COL4A5-208ENST00000505728 MAPRE1Q15691 268 aaKnown RBP8.44□□□□□ -1.06
COL4A5-208ENST00000505728 TAZQ16635 292 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 CCDC14Q49A88 953 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 ATP13A4Q4VNC1 1196 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 PLEKHG4Q58EX7 1191 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 TFDP3Q5H9I0 405 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 NOMO2Q5JPE7 1267 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 DAB2IPQ5VWQ8 1189 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 ALS2CLQ60I27 953 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 FAM171BQ6P995 826 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 MFSD7Q6UXD7 560 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 SLC39A5Q6ZMH5 540 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 PAQR9Q6ZVX9 377 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 SLC26A9Q7LBE3 791 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 VSIG1Q86XK7 387 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 FUKQ8N0W3 1084 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 THEM5Q8N1Q8 247 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 MREGQ8N565 214 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 EMC1Q8N766 993 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 TTC13Q8NBP0 860 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 C3orf58Q8NDZ4 430 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 RSPH1Q8WYR4 309 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 SEPT8Q92599 483 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 LRRC45Q96CN5 670 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 SUSD3Q96L08 255 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 GUCD1Q96NT3 240 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 TBCBQ99426 244 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 LPIN3Q9BQK8 851 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 MED10Q9BTT4 135 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 DDX23Q9BUQ8 820 aaKnown RBP8.44□□□□□ -1.06
COL4A5-208ENST00000505728 FRMD8P1Q9BZ68 369 aaPredicted RBP8.44□□□□□ -1.06
COL4A5-208ENST00000505728 LRRC4Q9HBW1 653 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 CRTAC1Q9NQ79 661 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 TMEM161AQ9NX61 479 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 HPCAL4Q9UM19 191 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 USP18Q9UMW8 372 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 ATP11BQ9Y2G3 1177 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 INPP5FQ9Y2H2 1132 aa8.44□□□□□ -1.06
COL4A5-208ENST00000505728 MUC3AQ02505 3323 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 ESYT3A0FGR9 886 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 LRRD1A4D1F6 860 aa8.43□□□□□ -1.06
COL4A5-208ENST00000505728 ZSCAN5CA6NGD5 496 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms