RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 IL9P15248 144 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 FSHRP23945 695 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 BRD2P25440 801 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 GNA15P30679 374 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 SOX5P35711 763 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 STAT1P42224 750 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 BCAT1P54687 386 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 MAP3K7CLP57077 242 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 NTHL1P78549 312 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 MEA1Q16626 185 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 PTPN21Q16825 1174 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 GOLGA7BQ2TAP0 167 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 PKDCCQ504Y2 493 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 PRSS36Q5K4E3 855 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 CYP4A22Q5TCH4 519 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 DENND5BQ6ZUT9 1274 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 TTC30AQ86WT1 665 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 NUP93Q8N1F7 819 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 GPR152Q8TDT2 470 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 IQCDQ96DY2 449 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 SPAG5Q96R06 1193 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 NUP58Q9BVL2 599 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 TTLL2Q9BWV7 592 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 PHF7Q9BWX1 381 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 ZNF334Q9HCZ1 680 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 IL37Q9NZH6 218 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 UXTQ9UBK9 157 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 HESX1Q9UBX0 185 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 PRKAG3Q9UGI9 489 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 KIF26AQ9ULI4 1882 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 ITIH6Q6UXX5 1313 aa12.59□□□□□ -0.39
PDLIM5-208ENST00000504489 HHLA1C9JL84 531 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 THAP12O43422 761 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 RTN3O95197 1032 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 CALCAP01258 141 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 SETSIPP0DME0 302 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 SLC8A3P57103 927 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 BST2Q10589 180 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 MTMR3Q13615 1198 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 PDZD4Q76G19 769 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 CACNA2D4Q7Z3S7 1137 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 SLC47A2Q86VL8 602 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 TTYH3Q9C0H2 523 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 IL21Q9HBE4 155 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 ACP6Q9NPH0 428 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 PCDHGC3Q9UN70 934 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 USTQ9Y2C2 406 aa12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 MRPS23Q9Y3D9 190 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-208ENST00000504489 SPTBN5Q9NRC6 3674 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 MYOFQ9NZM1 2061 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 A0A1W2PQJ5 194 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 FAM92AA1XBS5 289 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 XPO1O14980 1071 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 AP5Z1O43299 807 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 MOSPD3O75425 235 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 GFPT2O94808 682 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 F11P03951 625 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 MYL4P12829 197 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 CYP11B1P15538 503 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 GABRR2P28476 465 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 CDC25CP30307 473 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 CCR2P41597 374 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 USP46P62068 366 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 PDE4CQ08493 712 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 SLC5A9Q2M3M2 681 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 GAREM2Q75VX8 874 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 OTOP3Q7RTS5 596 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 FMNL3Q8IVF7 1028 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 STKLD1Q8NE28 680 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 ITFG1Q8TB96 612 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 UBA3Q8TBC4 463 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 SLC35F5Q8WV83 523 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 BAP1Q92560 729 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 TCEAL4Q96EI5 215 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 FBXO44Q9H4M3 255 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 MAGED2Q9UNF1 606 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 NR2E1Q9Y466 385 aa12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 ZFP37Q9Y6Q3 630 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-208ENST00000504489 SOBPA7XYQ1 873 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 M0QYV0 167 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 CCDC172P0C7W6 258 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 YWHAQP27348 245 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 KRT9P35527 623 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 PLA2G4AP47712 749 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 PPP3CCP48454 512 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 KIF11P52732 1056 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 SLC5A3P53794 718 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 PLCB2Q00722 1185 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 RAB41Q5JT25 222 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 TJAP1Q5JTD0 557 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 DENND1BQ6P3S1 775 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 TMEM150AQ86TG1 271 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 PIGZQ86VD9 579 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 ZNF677Q86XU0 584 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 ADHFE1Q8IWW8 467 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 SCAMP5Q8TAC9 235 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 SHKBP1Q8TBC3 707 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms