RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 KIAA1257Q9ULG3 409 aa10.63□□□□□ -0.71
NUP54-203ENST00000504173 SLC27A5Q9Y2P5 690 aa10.63□□□□□ -0.71
NUP54-203ENST00000504173 YIPF1Q9Y548 306 aa10.63□□□□□ -0.71
NUP54-203ENST00000504173 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.63□□□□□ -0.71
NUP54-203ENST00000504173 INSL5Q9Y5Q6 135 aa10.63□□□□□ -0.71
NUP54-203ENST00000504173 BPTFQ12830 3046 aa10.63□□□□□ -0.71
NUP54-203ENST00000504173 MYO10Q9HD67 2058 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 GOLGA6L3A6NEY3 463 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 THAP12O43422 761 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 ABCB7O75027 752 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 ZMYND10O75800 440 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 SOAT2O75908 522 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 GFPT2O94808 682 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 LRG1P02750 347 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 PROS1P07225 676 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 FAM200BP0CF97 657 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 SP9P0CG40 484 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 HAPLN1P10915 354 aaPredicted RBP10.62□□□□□ -0.71
NUP54-203ENST00000504173 HOXB8P17481 243 aaPredicted RBP10.62□□□□□ -0.71
NUP54-203ENST00000504173 BRD2P25440 801 aaKnown RBP10.62□□□□□ -0.71
NUP54-203ENST00000504173 GNA15P30679 374 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 SOX5P35711 763 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 GRIK1P39086 918 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 MAGEA11P43364 429 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 ALDH1A3P47895 512 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 ZNF75DP51815 510 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 JAM2P57087 298 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 BPIFB4P59827 614 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 PTK2Q05397 1052 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 TWF1Q12792 350 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 PLD1Q13393 1074 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 GOLGA7BQ2TAP0 167 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 PPM1JQ5JR12 505 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 PPP1R26Q5T8A7 1209 aaPredicted RBP10.62□□□□□ -0.71
NUP54-203ENST00000504173 ARHGAP17Q68EM7 881 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 SPECC1LQ69YQ0 1117 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 ANKRD54Q6NXT1 300 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 SYCE2Q6PIF2 218 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 VSTM1Q6UX27 236 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 RTL10Q7L3V2 364 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 GPIHBP1Q8IV16 184 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 ZDHHC14Q8IZN3 488 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 FUKQ8N0W3 1084 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 HNRNPABQ99729 332 aaKnown RBP10.62□□□□□ -0.71
NUP54-203ENST00000504173 EDEM3Q9BZQ6 932 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 TTYH3Q9C0H2 523 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 ZDHHC7Q9NXF8 308 aa10.62□□□□□ -0.71
NUP54-203ENST00000504173 MTCL1Q9Y4B5 1905 aaKnown RBP10.62□□□□□ -0.71
NUP54-203ENST00000504173 A0A1W2PQJ5 194 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 O00370 1275 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 TRIM66O15016 1216 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 CCL16O15467 120 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 MED7O43513 233 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 RFPL2O75678 378 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 AP1G2O75843 785 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 CALCAP01258 141 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 TPM1P09493 284 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 HNRNPA1P09651 372 aaKnown RBP eCLIP10.61□□□□□ -0.71
NUP54-203ENST00000504173 SP100P23497 879 aaPredicted RBP10.61□□□□□ -0.71
NUP54-203ENST00000504173 ANXA13P27216 316 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 HOXA9P31269 272 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 CLCN1P35523 988 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 GPR15P49685 360 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 PDE6CP51160 858 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 EPHB3P54753 998 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 RPL10AP62906 217 aaKnown RBP10.61□□□□□ -0.71
NUP54-203ENST00000504173 TRIM14Q14142 442 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 VEPH1Q14D04 833 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 STILQ15468 1287 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 RARS2Q5T160 578 aaKnown RBP10.61□□□□□ -0.71
NUP54-203ENST00000504173 PAQR9Q6ZVX9 377 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 TMC6Q7Z403 805 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 SLC47A2Q86VL8 602 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 FMNL3Q8IVF7 1028 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 ELMOD1Q8N336 334 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 C12orf76Q8N812 135 aaPredicted RBP10.61□□□□□ -0.71
NUP54-203ENST00000504173 ZNF397Q8NF99 534 aaPredicted RBP10.61□□□□□ -0.71
NUP54-203ENST00000504173 CPLX3Q8WVH0 158 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 TFAP2BQ92481 460 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 BAP1Q92560 729 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 MRFAP1L1Q96HT8 127 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 NECTIN4Q96NY8 510 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 APOL5Q9BWW9 433 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 GRPEL1Q9HAV7 217 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 DMAP1Q9NPF5 467 aaPredicted RBP10.61□□□□□ -0.71
NUP54-203ENST00000504173 ACP6Q9NPH0 428 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 NCDNQ9UBB6 729 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 HESX1Q9UBX0 185 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 TSPAN16Q9UKR8 245 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 MYO6Q9UM54 1294 aa10.61□□□□□ -0.71
NUP54-203ENST00000504173 CCDC195A0A1B0GUA6 201 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 LRRC53A6NM62 1247 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 F8VP50 259 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 M0QYV0 167 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 XYLBO75191 536 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 MICAL2O94851 1124 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 ADCY5O95622 1261 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 GYPCP04921 128 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 ASGR2P07307 311 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 CCDC172P0C7W6 258 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms