RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 HPDLQ96IR7 371 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 PRPF18Q99633 342 aaKnown RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 SH3GL3Q99963 347 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 EMILIN2Q9BXX0 1053 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 ILKAPQ9H0C8 392 aaPredicted RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 FBXO44Q9H4M3 255 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 DHX35Q9H5Z1 703 aaKnown RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 DHX33Q9H6R0 707 aaKnown RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 MANSC1Q9H8J5 431 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 AAASQ9NRG9 546 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 BLOC1S4Q9NUP1 217 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 FNIP2Q9P278 1114 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 STX18Q9P2W9 335 aaKnown RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 XPO7Q9UIA9 1087 aaKnown RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 RABGEF1Q9UJ41 708 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 AGAP1Q9UPQ3 857 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 TMEM120BA0PK00 339 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 MAGEA13PA6NCF6 341 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 APOC4-APOC2K7ER74 178 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 EEF2KO00418 725 aaKnown RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 BIRC5O15392 142 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 FGF10O15520 208 aaPredicted RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 MED24O75448 989 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 APOC2P02655 101 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 PSMD7P51665 324 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 ITGA8P53708 1063 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 CDK18Q07002 472 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 MGAT5Q09328 741 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 PTK7Q13308 1070 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 CAPRIN1Q14444 709 aaKnown RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 MTF1Q14872 753 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 WDR72Q3MJ13 1102 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 LRRC23Q53EV4 343 aaPredicted RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 ZNF394Q53GI3 561 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 RNF219Q5W0B1 726 aaPredicted RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 MFSD5Q6N075 450 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 GLB1LQ6UWU2 654 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 C1orf186Q6ZWK4 172 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 PID1Q7Z2X4 250 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 LRP10Q7Z4F1 713 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 NT5DC3Q86UY8 548 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 RIOX2Q8IUF8 465 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 SPATA2LQ8IUW3 424 aaPredicted RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 PTCD2Q8WV60 388 aaKnown RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 SHC3Q92529 594 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 MCCC1Q96RQ3 725 aaPredicted RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 IL25Q9H293 177 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 LHX5Q9H2C1 402 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 RETREG1Q9H6L5 497 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 INTS13Q9NVM9 706 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 RGL1Q9NZL6 768 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 SLC13A4Q9UKG4 626 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 CDYLQ9Y232 598 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 A0A1W2PQ67 120 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 TRAFD1O14545 582 aaPredicted RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 CREB3O43889 395 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 KLRC4O43908 158 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 SRGAP2O75044 1071 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 PSMD10O75832 226 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 CD44P16070 742 aaKnown RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 KRT4P19013 534 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 PTPN4P29074 926 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 CSE1LP55060 971 aaKnown RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 NCKAP1LP55160 1127 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 FUT2Q10981 343 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 RCN2Q14257 317 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 INSCQ1MX18 579 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 SLC45A4Q5BKX6 768 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 RABGAP1LQ5R372 815 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 DACT2Q5SW24 774 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 RNF43Q68DV7 783 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 SPOCD1Q6ZMY3 1216 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 LRRC55Q6ZSA7 311 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 UNC45BQ8IWX7 931 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 FAM71AQ8IYT1 594 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 C12orf50Q8NA57 414 aaPredicted RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 KIAA0895Q8NCT3 520 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 PARD3BQ8TEW8 1205 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 MAGED4Q96JG8 741 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 CCT7Q99832 543 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 SGIP1Q9BQI5 828 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 MTFR1LQ9H019 292 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 MUC13Q9H3R2 512 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 EFCAB1Q9HAE3 211 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 TJP2Q9UDY2 1190 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 CORO1CQ9ULV4 474 aaPredicted RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 TNFSF13BQ9Y275 285 aa4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 ATF5Q9Y2D1 282 aaPredicted RBP4.93□□□□□ -1.62
NDFIP1-202ENST00000503388 A0A0G2JND7 137 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 TCP11X1B4DZS4 312 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 QSOX1O00391 747 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 LIN7AO14910 233 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SLC37A4O43826 429 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 MSCO60682 206 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ITGAVP06756 1048 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 NCF2P19878 526 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ICAM3P32942 547 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SULT1E1P49888 294 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PTPN11Q06124 597 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PRKAA1Q13131 559 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms