RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 ARSAP15289 507 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 HDCP19113 662 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 ACAT1P24752 427 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 GJA4P35212 333 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 RAP1GAPP47736 663 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 GPR15P49685 360 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 PRR20EP86478 221 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 PRR20CP86479 221 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 PRR20DP86480 221 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 PRR20BP86481 221 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 PRR20AP86496 221 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 CEBPZQ03701 1054 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 SDHAF4Q5VUM1 108 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 SYT13Q7L8C5 426 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 KIAA1958Q8N8K9 716 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 TTC16Q8NEE8 873 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 CD101Q93033 1021 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 CHAMP1Q96JM3 812 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 SPATA17Q96L03 361 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 CLIC6Q96NY7 704 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 CBWD1Q9BRT8 395 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 PANK2Q9BZ23 570 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 IKZF4Q9H2S9 585 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 CUEDC2Q9H467 287 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 PCIF1Q9H4Z3 704 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 VPS45Q9NRW7 570 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 INTS13Q9NVM9 706 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 PCDHB9Q9Y5E1 797 aa11.9□□□□□ -0.5
UBE2D3-211ENST00000502404 ACACBO00763 2458 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 FRMD3A2A2Y4 597 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 SLC9A3R1O14745 358 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 PRPF6O94906 941 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 TCF3P15923 654 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 GRIK1P39086 918 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 PXNP49023 591 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 PSMD2Q13200 908 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 SLC39A14Q15043 492 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 ZNF77Q15935 545 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 SOWAHAQ2M3V2 549 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 USP39Q53GS9 565 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 FAM171BQ6P995 826 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 KBTBD6Q86V97 674 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 SH3RF2Q8TEC5 729 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 GLMNQ92990 594 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 CDK15Q96Q40 435 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 CYP2S1Q96SQ9 504 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 MMS19Q96T76 1030 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 PKMYT1Q99640 499 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 SYT15Q9BQS2 421 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 TNMDQ9H2S6 317 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 SNX25Q9H3E2 840 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 C2orf42Q9NWW7 574 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 EBF1Q9UH73 591 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 ARHGAP26Q9UNA1 814 aa11.89□□□□□ -0.51
UBE2D3-211ENST00000502404 CACNA1BQ00975 2339 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 TCHHQ07283 1943 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 RALGAPA1Q6GYQ0 2036 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 OTOL1A6NHN0 477 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 SYT1P21579 422 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 WARSP23381 471 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 GNL1P36915 607 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 CASP5P51878 434 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 SNRPFP62306 86 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 CYP27A1Q02318 531 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 RESTQ13127 1097 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 DMC1Q14565 340 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 STK38Q15208 465 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 EML3Q32P44 896 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 PKN3Q6P5Z2 889 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 DENND5BQ6ZUT9 1274 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 WDR49Q8IV35 697 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 ARL14EPQ8N8R7 260 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 RPLP0P6Q8NHW5 317 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 CXorf38Q8TB03 319 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 CHFRQ96EP1 664 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 INTS4Q96HW7 963 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 FNBP1Q96RU3 617 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 SIX4Q9UIU6 781 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 WNT6Q9Y6F9 365 aa11.88□□□□□ -0.51
UBE2D3-211ENST00000502404 SDK1Q7Z5N4 2213 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 EIF3DO15371 548 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 PDGFRBP09619 1106 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 TNNI1P19237 187 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 BDNFP23560 247 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 MPLP40238 635 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 DGKEP52429 567 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 TNNC1P63316 161 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 FOXC1Q12948 553 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 USP4Q13107 963 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 SF3A2Q15428 464 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 PLK5Q496M5 336 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 STPG1Q5TH74 334 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 TDRD10Q5VZ19 366 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 HS2ST1Q7LGA3 356 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 LIMS2Q7Z4I7 341 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 OSTM1Q86WC4 334 aa11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 DDX42Q86XP3 938 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBE2D3-211ENST00000502404 PDILTQ8N807 584 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms