RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 RXRAP19793 462 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CSTF2P33240 577 aaKnown RBP eCLIP5.7□□□□□ -1.59e-8■■■■□ 22.8
FXN-205ENST00000498653 NOS2P35228 1153 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CCT8P50990 548 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 USP11P51784 963 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 ADCY7P51828 1080 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 POLE2P56282 527 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 ASIC1P78348 528 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CCT2P78371 535 aaKnown RBP5.7□□□□□ -1.5
FXN-205ENST00000498653 IL9RQ01113 521 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 ZNF543Q08ER8 600 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 LBRQ14739 615 aaKnown RBP5.7□□□□□ -1.5
FXN-205ENST00000498653 PTPAQ15257 358 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CDC37Q16543 378 aaPredicted RBP5.7□□□□□ -1.5
FXN-205ENST00000498653 HIF1AQ16665 826 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 ME3Q16798 604 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 GNPTABQ3T906 1256 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 TBCELQ5QJ74 424 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 GPATCH4Q5T3I0 446 aaKnown RBP5.7□□□□□ -1.5
FXN-205ENST00000498653 RIPOR1Q6ZS17 1223 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 GDF7Q7Z4P5 450 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CCDC83Q8IWF9 413 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 NECAB1Q8N987 351 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 BPIFB1Q8TDL5 484 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 DNASE2BQ8WZ79 361 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 GTF3C6Q969F1 213 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 LZTS2Q9BRK4 669 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CPVLQ9H3G5 476 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 EBF3Q9H4W6 596 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 SLITRK6Q9H5Y7 841 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 RSAD1Q9HA92 442 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 NCOA5Q9HCD5 579 aaKnown RBP5.7□□□□□ -1.5
FXN-205ENST00000498653 CD93Q9NPY3 652 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CALCOCO1Q9P1Z2 691 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 ADAM28Q9UKQ2 775 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 GPC6Q9Y625 555 aaPredicted RBP5.7□□□□□ -1.5
FXN-205ENST00000498653 NFASCO94856 1347 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 KIF26BQ2KJY2 2108 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 TCRBV21S2A2A0A5A6 115 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 PMS2P1A4D2B8 440 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 KLRF2D3W0D1 207 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 K7EQS6 105 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 PRMT3O60678 531 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 USP12O75317 370 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 GJB6O95452 261 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 GOLGA8HP0CJ92 632 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 DARSP14868 501 aaKnown RBP5.69□□□□□ -1.5
FXN-205ENST00000498653 ARSAP15289 507 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 CDC27P30260 824 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 WEE1P30291 646 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 OR1D2P34982 312 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 GJA4P35212 333 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 DUSP3P51452 185 aaPredicted RBP5.69□□□□□ -1.5
FXN-205ENST00000498653 AKAP17AQ02040 695 aaKnown RBP5.69□□□□□ -1.5
FXN-205ENST00000498653 SSRP1Q08945 709 aaKnown RBP5.69□□□□□ -1.5
FXN-205ENST00000498653 SPIRE1Q08AE8 756 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 CUL4AQ13619 759 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 KIF19Q2TAC6 998 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 EFHC2Q5JST6 749 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 FOXR1Q6PIV2 292 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 TMTC3Q6ZXV5 915 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 HEATR4Q86WZ0 1026 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 SLC7A3Q8WY07 619 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 CD101Q93033 1021 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 PRR11Q96HE9 360 aaPredicted RBP5.69□□□□□ -1.5
FXN-205ENST00000498653 ZNF668Q96K58 619 aaPredicted RBP5.69□□□□□ -1.5
FXN-205ENST00000498653 LLPHQ9BRT6 129 aaKnown RBP5.69□□□□□ -1.5
FXN-205ENST00000498653 UBA5Q9GZZ9 404 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 NEUROD4Q9HD90 331 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 ZNF71Q9NQZ8 489 aaPredicted RBP5.69□□□□□ -1.5
FXN-205ENST00000498653 CEP72Q9P209 647 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 KANSL3Q9P2N6 904 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 MAD2L2Q9UI95 211 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.69□□□□□ -1.5
FXN-205ENST00000498653 SNX11Q9Y5W9 270 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 USP3Q9Y6I4 520 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 SLCO1B1Q9Y6L6 691 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 PCLOQ9Y6V0 5065 aa5.69□□□□□ -1.5
FXN-205ENST00000498653 E2F8A0AVK6 867 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 H0Y8X5 98 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 NOBOXO60393 691 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 ADAM23O75077 832 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 CSDE1O75534 798 aaKnown RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 PLEKHA8P1O95397 391 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 LDOC1O95751 146 aaPredicted RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 MYL4P12829 197 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 IFNAR1P17181 557 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 GABRG2P18507 467 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 MSX1P28360 303 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 SMARCA1P28370 1054 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 HOXA13P31271 388 aaPredicted RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 CLCN3P51790 818 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 HDAC4P56524 1084 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 NLRP11P59045 1033 aaKnown RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 HMGN5P82970 282 aaKnown RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 ILKQ13418 452 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 INAVAQ3KP66 663 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 ARSJQ5FYB0 599 aaPredicted RBP5.68□□□□□ -1.5
FXN-205ENST00000498653 WDR45BQ5MNZ6 344 aa5.68□□□□□ -1.5
FXN-205ENST00000498653 SYCP2LQ5T4T6 812 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms