RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 TMEM59LQ9UK28 342 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 PCDHB5Q9Y5E4 795 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 COL4A6Q14031 1691 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 C2CD4BA6NLJ0 364 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 F8W810 466 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 TULP2O00295 520 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 CLDN5O00501 218 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 TRIM66O15016 1216 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 DAB1O75553 588 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 GJB6O95452 261 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 PDGFRAP16234 1089 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 MCM3P25205 808 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 MAGEA11P43364 429 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 TKTL1P51854 596 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 COPS2P61201 443 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 MRPS5P82675 430 aaKnown RBP12.78□□□□□ -0.36
HPS1-213ENST00000497527 LONRF2Q1L5Z9 754 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 GLE1Q53GS7 698 aaKnown RBP12.78□□□□□ -0.36
HPS1-213ENST00000497527 ZFYVE27Q5T4F4 411 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 KCNT2Q6UVM3 1135 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 CEP57Q86XR8 500 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 SCUBE3Q8IX30 993 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 RCOR2Q8IZ40 523 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 GPR161Q8N6U8 529 aaKnown RBP12.78□□□□□ -0.36
HPS1-213ENST00000497527 EXD1Q8NHP7 514 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 RXFP2Q8WXD0 754 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 IRGQQ8WZA9 623 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 RUBCNQ92622 972 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 KRT35Q92764 455 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 TMEM169Q96HH4 297 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 IGSF21Q96ID5 467 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 RUNDC3BQ96NL0 473 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 SMOQ99835 787 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 GPR62Q9BZJ7 368 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 TRIM7Q9C029 511 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 CWH43Q9H720 699 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 RC3H2Q9HBD1 1191 aaKnown RBP12.78□□□□□ -0.36
HPS1-213ENST00000497527 TMEM51Q9NW97 253 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 RRN3Q9NYV6 651 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 MTUS1Q9ULD2 1270 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 STAP1Q9ULZ2 295 aa12.78□□□□□ -0.36
HPS1-213ENST00000497527 ZBBXA8MT70 800 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 PDE2AO00408 941 aaPredicted RBP12.77□□□□□ -0.37
HPS1-213ENST00000497527 ZRANB2O95218 330 aaKnown RBP eCLIP12.77□□□□□ -0.37
HPS1-213ENST00000497527 FGGP02679 453 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 ACRP10323 421 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 CPB1P15086 417 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 BDNFP23560 247 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 RNASE9P60153 205 aaKnown RBP12.77□□□□□ -0.37
HPS1-213ENST00000497527 OGDHQ02218 1023 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 ZNF252P-AS1Q0IIN9 211 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 SMC1AQ14683 1233 aaKnown RBP12.77□□□□□ -0.37
HPS1-213ENST00000497527 ERCC6LQ2NKX8 1250 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 SLC39A12Q504Y0 691 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 RAB41Q5JT25 222 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 GPR65Q8IYL9 337 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 EMC1Q8N766 993 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 SPPL2BQ8TCT7 592 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 ALG3Q92685 438 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 MS4A14Q96JA4 679 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 SLC9A7Q96T83 725 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 YME1L1Q96TA2 773 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 TBCBQ99426 244 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.77□□□□□ -0.37
HPS1-213ENST00000497527 BACE2Q9Y5Z0 518 aa12.77□□□□□ -0.37
HPS1-213ENST00000497527 PLXNA3P51805 1871 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 F8VP50 259 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 PIK3R2O00459 728 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 KRIT1O00522 736 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 PRPSAP2O60256 369 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 LRCH4O75427 683 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 BEST1O76090 585 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 SOD2P04179 222 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 NOS2P35228 1153 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 GRIK1P39086 918 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 MARCKSL1P49006 195 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 DAOAP59103 153 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 TAS2R40P59535 323 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 YWHAZP63104 245 aaKnown RBP12.76□□□□□ -0.37
HPS1-213ENST00000497527 DEFB103AP81534 67 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 CREMQ03060 361 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 C2orf54Q08AI8 447 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 GPR17Q13304 367 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 BOLA3Q53S33 107 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 DCAF12L1Q5VU92 463 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 KIAA1841Q6NSI8 718 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 STRADAQ7RTN6 431 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 LRRTM3Q86VH5 581 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 SLC13A5Q86YT5 568 aaPredicted RBP12.76□□□□□ -0.37
HPS1-213ENST00000497527 CCDC50Q8IVM0 306 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 C7orf61Q8IZ16 206 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 SLC39A11Q8N1S5 342 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 ZMIZ2Q8NF64 920 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 PHOSPHO2Q8TCD6 241 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 PIK3R5Q8WYR1 880 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 BADQ92934 168 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 FAM149B1Q96BN6 582 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 C8orf48Q96LL4 319 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 CEP295NLQ96MC4 621 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 HERC2P3Q9BVR0 1158 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms