RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 SIK3Q9Y2K2 1263 aa6.78□□□□□ -1.32
SIK3-213ENST00000497049 HIF3AQ9Y2N7 669 aa6.78□□□□□ -1.32
SIK3-213ENST00000497049 ATXN2Q99700 1313 aaKnown RBP6.77□□□□□ -1.32
SIK3-213ENST00000497049 MEIS3P2A8K0S8 358 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 PTGESO14684 152 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 VNN1O95497 513 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 TMEM191BP0C7N4 346 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 TRIM49P0CI25 452 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 TRIM49CP0CI26 452 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 SLC9A1P19634 815 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 MXI1P50539 228 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 EPHB4P54760 987 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 DSC1Q08554 894 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 LRMPQ12912 555 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 TRPC3Q13507 836 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 NAB2Q15742 525 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 ZNF423Q2M1K9 1284 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 EPC2Q52LR7 807 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 DCAF17Q5H9S7 520 aaPredicted RBP6.77□□□□□ -1.33
SIK3-213ENST00000497049 CLLU1OSQ5K130 101 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 RASIP1Q5U651 963 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 KLHDC7AQ5VTJ3 777 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 TDRD10Q5VZ19 366 aaKnown RBP6.77□□□□□ -1.33
SIK3-213ENST00000497049 SPECC1LQ69YQ0 1117 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 PSRC1Q6PGN9 363 aaPredicted RBP6.77□□□□□ -1.33
SIK3-213ENST00000497049 DCLRE1AQ6PJP8 1040 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 NXPE4Q6UWF7 544 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 DPH6Q7L8W6 267 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 VSTM4Q8IW00 320 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 EFCAB13Q8IY85 973 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 LRRC52Q8N7C0 313 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 PPM1EQ8WY54 764 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 RABGGTAQ92696 567 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 LPPQ93052 612 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 TP53INP1Q96A56 240 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 UROC1Q96N76 676 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 APOL6Q9BWW8 343 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 CXCL16Q9H2A7 254 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 FAM124BQ9H5Z6 455 aaPredicted RBP6.77□□□□□ -1.33
SIK3-213ENST00000497049 KCNK4Q9NYG8 393 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 SIX4Q9UIU6 781 aa6.77□□□□□ -1.33
SIK3-213ENST00000497049 PTPRJQ12913 1337 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 ITIH6Q6UXX5 1313 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 LOC100289279A0A1B0GTE1 492 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 A0A1W2PQJ5 194 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 VGLL3A8MV65 326 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 PES1O00541 588 aaKnown RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 MAP2K7O14733 419 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 SART1O43290 800 aaKnown RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 NOL4O94818 638 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 DDHD2O94830 711 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 WISP1O95388 367 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 ASS1P00966 412 aaKnown RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 HLA-DRAP01903 254 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 NFICP08651 508 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 SYN1P17600 705 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 BMP8BP34820 402 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 MLH1P40692 756 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 USP8P40818 1118 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 PNPLA4P41247 253 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 GTF2A1P52655 376 aaPredicted RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 LILRA4P59901 499 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 WDR5P61964 334 aaKnown RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 HTRA4P83105 476 aaPredicted RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 MYO1EQ12965 1108 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 GRIK3Q13003 919 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 TBX2Q13207 712 aaPredicted RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 TUSC3Q13454 348 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 POU4F3Q15319 338 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 UPP1Q16831 310 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 EXOSC6Q5RKV6 272 aaKnown RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 C9orf57Q5W0N0 161 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 TRIM65Q6PJ69 517 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 LEKR1Q6ZMV7 388 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 ENOSF1Q7L5Y1 443 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 OTOP2Q7RTS6 562 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 CCDC91Q7Z6B0 441 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 COLGALT2Q8IYK4 626 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 ABI1Q8IZP0 508 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 RNF169Q8NCN4 708 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 URGCPQ8TCY9 931 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 TAS1R2Q8TE23 839 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 UBASH3BQ8TF42 649 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 SEMA4DQ92854 862 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 C18orf25Q96B23 403 aaPredicted RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 FAM193BQ96PV7 902 aaPredicted RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 RPS6KC1Q96S38 1066 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.76□□□□□ -1.339e-15■□□□□ 9.1
SIK3-213ENST00000497049 TMEM175Q9BSA9 504 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 CRACR2AQ9BSW2 395 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 NAA15Q9BXJ9 866 aaKnown RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 EMILIN2Q9BXX0 1053 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 MRPL9Q9BYD2 267 aaKnown RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 TMPRSS13Q9BYE2 586 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 STK33Q9BYT3 514 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 MTMR12Q9C0I1 747 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 XYLT2Q9H1B5 865 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 MTIF3Q9H2K0 278 aaKnown RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 ACBD3Q9H3P7 528 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 MMRN2Q9H8L6 949 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms