RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 RUNX3Q13761 415 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 NCOA4Q13772 614 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 ZNF268Q14587 947 aaPredicted RBP8.35□□□□□ -1.07
SRRM1-220ENST00000496882 PDGFRLQ15198 375 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 TDRD10Q5VZ19 366 aaKnown RBP8.35□□□□□ -1.07
SRRM1-220ENST00000496882 TXNDC8Q6A555 127 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 FAM171BQ6P995 826 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 SLC9A9Q8IVB4 645 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 CPA6Q8N4T0 437 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 KIAA0895Q8NCT3 520 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 STKLD1Q8NE28 680 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 PARD3BQ8TEW8 1205 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 KBTBD7Q8WVZ9 684 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 RUBCNQ92622 972 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 PCED1BQ96HM7 432 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 SPATA17Q96L03 361 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 MYRFLQ96LU7 910 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 SLITRK1Q96PX8 696 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 HS3ST6Q96QI5 342 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 PKMYT1Q99640 499 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 MRPL45Q9BRJ2 306 aaKnown RBP8.35□□□□□ -1.07
SRRM1-220ENST00000496882 SMG9Q9H0W8 520 aaKnown RBP8.35□□□□□ -1.07
SRRM1-220ENST00000496882 GKN1Q9NS71 199 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 GTSE1Q9NYZ3 720 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 NCDNQ9UBB6 729 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 HOOK1Q9UJC3 728 aaKnown RBP8.35□□□□□ -1.07
SRRM1-220ENST00000496882 HPSEQ9Y251 543 aa8.35□□□□□ -1.07
SRRM1-220ENST00000496882 NCANO14594 1321 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 LRRIQ3A6PVS8 624 aaPredicted RBP8.34□□□□□ -1.07
SRRM1-220ENST00000496882 ARNTLO00327 626 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 HCRTO43612 131 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 DXOO77932 396 aaKnown RBP8.34□□□□□ -1.07
SRRM1-220ENST00000496882 RHOBTB3O94955 611 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 RTN3O95197 1032 aaPredicted RBP8.34□□□□□ -1.07
SRRM1-220ENST00000496882 ABL1P00519 1130 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 PFKLP17858 780 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 HDCP19113 662 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 NR2F2P24468 414 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 SOX9P48436 509 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 CASP4P49662 377 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 NUCB2P80303 420 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 IFRD2Q12894 506 aaPredicted RBP8.34□□□□□ -1.07
SRRM1-220ENST00000496882 MTF1Q14872 753 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 PON2Q15165 354 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 SGSM1Q2NKQ1 1148 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 SCARA5Q6ZMJ2 495 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 KRBA2Q6ZNG9 492 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 INTS8Q75QN2 995 aaKnown RBP8.34□□□□□ -1.07
SRRM1-220ENST00000496882 LIMS2Q7Z4I7 341 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 SYNPOQ8N3V7 929 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 SPEM1Q8N4L4 309 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 B3GALNT2Q8NCR0 500 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 PDZD8Q8NEN9 1154 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 TAF4BQ92750 862 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 USP13Q92995 863 aaPredicted RBP8.34□□□□□ -1.07
SRRM1-220ENST00000496882 ATP2A3Q93084 1043 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 C8orf48Q96LL4 319 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 SPSB2Q99619 263 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 CRTAC1Q9NQ79 661 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 PRMT8Q9NR22 394 aaPredicted RBP8.34□□□□□ -1.07
SRRM1-220ENST00000496882 RMND1Q9NWS8 449 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 DUS2Q9NX74 493 aaKnown RBP8.34□□□□□ -1.07
SRRM1-220ENST00000496882 GMEB2Q9UKD1 530 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 TICRRQ7Z2Z1 1910 aa8.34□□□□□ -1.07
SRRM1-220ENST00000496882 NUP210Q8TEM1 1887 aaPredicted RBP8.34□□□□□ -1.07
SRRM1-220ENST00000496882 FAM237AA0A1B0GTK4 181 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 F8VP50 259 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 IKBKBO14920 756 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 MAPK13O15264 365 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 ATG13O75143 517 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 ZNF202O95125 648 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 NFATC1O95644 943 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 CHRNB1P11230 501 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 PSMC2P35998 433 aaKnown RBP8.33□□□□□ -1.08
SRRM1-220ENST00000496882 VAMP7P51809 220 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 NOP14P78316 857 aaKnown RBP8.33□□□□□ -1.08
SRRM1-220ENST00000496882 TNK2Q07912 1038 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 DPYDQ12882 1025 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 CCDC142Q17RM4 750 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 CRTC2Q53ET0 693 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-220ENST00000496882 SCARA3Q6AZY7 606 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 TSSK4Q6SA08 328 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 TMEM150AQ86TG1 271 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 DDX42Q86XP3 938 aaKnown RBP eCLIP8.33□□□□□ -1.08
SRRM1-220ENST00000496882 FAM186BQ8IYM0 893 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 MAML2Q8IZL2 1156 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-220ENST00000496882 NUP93Q8N1F7 819 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 GUF1Q8N442 669 aaKnown RBP8.33□□□□□ -1.08
SRRM1-220ENST00000496882 GPR161Q8N6U8 529 aaKnown RBP8.33□□□□□ -1.08
SRRM1-220ENST00000496882 ARL14EPQ8N8R7 260 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-220ENST00000496882 PLPP7Q8NBV4 271 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 ZBTB44Q8NCP5 570 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 CCDC26Q8TAB7 109 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 SH3RF2Q8TEC5 729 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 TMEM174Q8WUU8 243 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 OSCP1Q8WVF1 389 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 ZNF516Q92618 1163 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 WNT2BQ93097 391 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 SMARCD1Q96GM5 515 aa8.33□□□□□ -1.08
SRRM1-220ENST00000496882 LRRC3BQ96PB8 259 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms