RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 KCTD10Q9H3F6 313 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 DMAC2Q9NW81 257 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 SMPD4Q9NXE4 827 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 DLL3Q9NYJ7 618 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 USP25Q9UHP3 1055 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 CDV3Q9UKY7 258 aaKnown RBP13.78□□□□□ -0.2
FN1-226ENST00000496542 ATP8B3O60423 1300 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 KIAA1549LQ6ZVL6 1849 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 MED19A0JLT2 244 aaPredicted RBP13.77□□□□□ -0.21
FN1-226ENST00000496542 PRR5-ARHGAP8B1AHC4 643 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 SCAMP3O14828 347 aaKnown RBP13.77□□□□□ -0.21
FN1-226ENST00000496542 VNN1O95497 513 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 NFATC1O95644 943 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 C4BPAP04003 597 aaKnown RBP13.77□□□□□ -0.21
FN1-226ENST00000496542 RPN1P04843 607 aaKnown RBP13.77□□□□□ -0.21
FN1-226ENST00000496542 TCF3P15923 654 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 PFKLP17858 780 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 SYKP43405 635 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 DLG4P78352 724 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 ARHGAP8P85298 464 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 ZXDBP98169 803 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 EML5Q05BV3 1969 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 NR1H3Q13133 447 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 CEP135Q66GS9 1140 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 FAM35AQ86V20 835 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 SLC9A9Q8IVB4 645 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 RPLP0P6Q8NHW5 317 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 CD101Q93033 1021 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 FBXO32Q969P5 355 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 HHIPQ96QV1 700 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 SDCBP2Q9H190 292 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 VRTNQ9H8Y1 702 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 HPSEQ9Y251 543 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 ZDHHC9Q9Y397 364 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 CPQQ9Y646 472 aa13.77□□□□□ -0.21
FN1-226ENST00000496542 PDXKO00764 312 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 MYL1P05976 194 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 YWHAQP27348 245 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 PPP3CCP48454 512 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 NDUFA8P51970 172 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 CLDN10P78369 228 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 SLC7A9P82251 487 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 ORC1Q13415 861 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 FBXO43Q4G163 708 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 FILIP1Q7Z7B0 1213 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 NUP93Q8N1F7 819 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 FAM160A2Q8N612 972 aaPredicted RBP13.76□□□□□ -0.21
FN1-226ENST00000496542 EZH1Q92800 747 aaPredicted RBP13.76□□□□□ -0.21
FN1-226ENST00000496542 CCDC47Q96A33 483 aaKnown RBP13.76□□□□□ -0.21
FN1-226ENST00000496542 TNIP3Q96KP6 325 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 KCNK16Q96T55 309 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 RNF38Q9H0F5 515 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.76□□□□□ -0.21
FN1-226ENST00000496542 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 FRMD4BQ9Y2L6 1034 aa13.76□□□□□ -0.21
FN1-226ENST00000496542 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.76□□□□□ -0.21
FN1-226ENST00000496542 ACACBO00763 2458 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 CALUO43852 315 aaPredicted RBP13.75□□□□□ -0.21
FN1-226ENST00000496542 LRP3O75074 770 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 RPP40O75818 363 aaKnown RBP13.75□□□□□ -0.21
FN1-226ENST00000496542 AP1G2O75843 785 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 RTN3O95197 1032 aaPredicted RBP13.75□□□□□ -0.21
FN1-226ENST00000496542 OAS1P00973 400 aaKnown RBP13.75□□□□□ -0.21
FN1-226ENST00000496542 CCDC192P0DO97 292 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 MBL2P11226 248 aaPredicted RBP13.75□□□□□ -0.21
FN1-226ENST00000496542 P4HA1P13674 534 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 SDHBP21912 280 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 PIK3CAP42336 1068 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 SEC13P55735 322 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 ZACNQ401N2 412 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 SPOPLQ6IQ16 392 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 ACOT1Q86TX2 421 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 SCAMP5Q8TAC9 235 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 TMC2Q8TDI7 906 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 GAB3Q8WWW8 586 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 ACDQ96AP0 544 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 SMARCD1Q96GM5 515 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 DMAP1Q9NPF5 467 aaPredicted RBP13.75□□□□□ -0.21
FN1-226ENST00000496542 KRT82Q9NSB4 513 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 SEMA4GQ9NTN9 838 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 HMGXB4Q9UGU5 601 aa13.75□□□□□ -0.21
FN1-226ENST00000496542 MYO18AQ92614 2054 aaKnown RBP13.75□□□□□ -0.21
FN1-226ENST00000496542 KIF20AO95235 890 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 OLFM2O95897 454 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 HLA-DRAP01903 254 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 CYP17A1P05093 508 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 CCDC130P13994 396 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 NDST1P52848 882 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 SLC5A3P53794 718 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 ATXN1P54253 815 aaKnown RBP13.74□□□□□ -0.21
FN1-226ENST00000496542 DMC1Q14565 340 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 SGSM1Q2NKQ1 1148 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 PRR23CQ6ZRP0 262 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 PAQR9Q6ZVX9 377 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 SV2AQ7L0J3 742 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 KBTBD6Q86V97 674 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 DDX42Q86XP3 938 aaKnown RBP eCLIP13.74□□□□□ -0.21
FN1-226ENST00000496542 PDZD8Q8NEN9 1154 aa13.74□□□□□ -0.21
FN1-226ENST00000496542 TMEM174Q8WUU8 243 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms