RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CHST7Q9NS84 486 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 CNOT8Q9UFF9 292 aaKnown RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 MRPS17Q9Y2R5 130 aaKnown RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 SPATA31D3P0C874 917 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 KRT3P12035 628 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 CCDC130P13994 396 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 DEKP35659 375 aaKnown RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 ARL4AP40617 200 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 ADKP55263 362 aaKnown RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 ZNF268Q14587 947 aaPredicted RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 CLUL1Q15846 466 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 TCTN1Q2MV58 587 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 KIAA0319Q5VV43 1072 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 C15orf39Q6ZRI6 1047 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 SPATA31D4Q6ZUB0 917 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 FAM71AQ8IYT1 594 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 ZSWIM2Q8NEG5 633 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 SEMA4DQ92854 862 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 LHX5Q9H2C1 402 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 DNMT3LQ9UJW3 386 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 DOCK5Q9H7D0 1870 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 SLC38A8A6NNN8 435 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 ZNF189O75820 626 aaPredicted RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 OR4Q2P0C623 313 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 SKILP12757 684 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 ACTN2P35609 894 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 EIF4A3P38919 411 aaKnown RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 PLA2G4AP47712 749 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 AARSP49588 968 aaKnown RBP eCLIP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 KRT81Q14533 505 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 GPR158Q5T848 1215 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 NUGGCQ68CJ6 796 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 GET4Q7L5D6 327 aaPredicted RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 DNAJB7Q7Z6W7 309 aaPredicted RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 PABPC5Q96DU9 382 aaKnown RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 PCED1BQ96HM7 432 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 HAUS4Q9H6D7 363 aa9.06□□□□□ -0.96
U2AF1-212ENST00000496462 EPN1Q9Y6I3 576 aaPredicted RBP9.06□□□□□ -0.96
U2AF1-212ENST00000496462 MYBPHLA2RUH7 354 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 SOBPA7XYQ1 873 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 TMEM110-MUSTN1A8MSY1 372 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 PPEF2O14830 753 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 NCAM2O15394 837 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 NCAM1P13591 858 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 ASPAP45381 313 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 PFKPQ01813 784 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 RNF219Q5W0B1 726 aaPredicted RBP9.05□□□□□ -0.96
U2AF1-212ENST00000496462 VN1R2Q8NFZ6 395 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 VWCEQ96DN2 955 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 APOL5Q9BWW9 433 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 ZFP14Q9HCL3 533 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 IP6K2Q9UHH9 426 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 ADAMTS1Q9UHI8 967 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 COL6A3P12111 3177 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 SYNJ2BP-COX16A0A087WUM0 186 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 TGM5O43548 720 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 CYP2F1P24903 491 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 PSMA2P25787 234 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 ERVFC1P60507 584 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 C1QBPQ07021 282 aaKnown RBP9.05□□□□□ -0.96
U2AF1-212ENST00000496462 PDE4CQ08493 712 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 SFSWAPQ12872 951 aaKnown RBP9.05□□□□□ -0.96
U2AF1-212ENST00000496462 EFHC2Q5JST6 749 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 MIIPQ5JXC2 388 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 PHLDB3Q6NSJ2 640 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 PIGZQ86VD9 579 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 CMASQ8NFW8 434 aaPredicted RBP9.05□□□□□ -0.96
U2AF1-212ENST00000496462 NXPE3Q969Y0 559 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 BORCS6Q96GS4 357 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 SPATA17Q96L03 361 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 B3GALT6Q96L58 329 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 XPO6Q96QU8 1125 aaKnown RBP9.05□□□□□ -0.96
U2AF1-212ENST00000496462 XYLT2Q9H1B5 865 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 ABHD10Q9NUJ1 306 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 COX16Q9P0S2 106 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 UVRAGQ9P2Y5 699 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 FBXW11Q9UKB1 542 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 USTQ9Y2C2 406 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 LTFP02788 710 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 TUBB4AP04350 444 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 ORC1Q13415 861 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 DDR2Q16832 855 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 SDE2Q6IQ49 451 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 ACAD10Q6JQN1 1059 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 IRF2BP1Q8IU81 584 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 GSTCDQ8NEC7 633 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 MAIP1Q8WWC4 291 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 PAAF1Q9BRP4 392 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 UBE2ZQ9H832 354 aaPredicted RBP9.05□□□□□ -0.96
U2AF1-212ENST00000496462 AIPL1Q9NZN9 384 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 SCN5AQ14524 2016 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 PTPRJQ12913 1337 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 FAM189A1O60320 539 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 FTLP02792 175 aaPredicted RBP9.05□□□□□ -0.96
U2AF1-212ENST00000496462 CHKAP35790 457 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 SULT1E1P49888 294 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 RAD23BP54727 409 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 YWHAZP63104 245 aaKnown RBP9.05□□□□□ -0.96
U2AF1-212ENST00000496462 DEUP1Q05D60 604 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms