RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 TRDMT1O14717 391 aaKnown RBP25.72■■□□□ 1.71
HLA-C-209ENST00000495835 LILRB5O75023 590 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 OLFM2O95897 454 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 EPB41P11171 864 aaKnown RBP25.72■■□□□ 1.71
HLA-C-209ENST00000495835 YWHAQP27348 245 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 NDST1P52848 882 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 TAF10Q12962 218 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 PON2Q15165 354 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 ACOT1Q86TX2 421 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 FUKQ8N0W3 1084 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 ADSSL1Q8N142 457 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 CPA6Q8N4T0 437 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 TTC39CQ8N584 583 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 TTC8Q8TAM2 541 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 ATP2A3Q93084 1043 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 TSG101Q99816 390 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 MED10Q9BTT4 135 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 CSNK1G1Q9HCP0 422 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 DUS2Q9NX74 493 aaKnown RBP25.72■■□□□ 1.71
HLA-C-209ENST00000495835 PCDHA5Q9Y5H7 936 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 FRYLO94915 3013 aa25.72■■□□□ 1.71
HLA-C-209ENST00000495835 TNFRSF10BO14763 440 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 TRIM49P0CI25 452 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 TRIM49CP0CI26 452 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 TDGF1P13385 188 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 PPP1R2P41236 205 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 IFNAR2P48551 515 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 FKBP3Q00688 224 aaKnown RBP25.71■■□□□ 1.71
HLA-C-209ENST00000495835 NR1H3Q13133 447 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 TMEM196Q5HYL7 178 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 SNX30Q5VWJ9 437 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 ZC3H3Q8IXZ2 948 aaKnown RBP25.71■■□□□ 1.71
HLA-C-209ENST00000495835 SMYD4Q8IYR2 804 aaPredicted RBP25.71■■□□□ 1.71
HLA-C-209ENST00000495835 RIN3Q8TB24 985 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 TAS1R2Q8TE23 839 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 SH3RF2Q8TEC5 729 aa25.71■■□□□ 1.71
HLA-C-209ENST00000495835 ZNF292O60281 2723 aa25.7■■□□□ 1.7
HLA-C-209ENST00000495835 FAM92AA1XBS5 289 aa25.7■■□□□ 1.7
HLA-C-209ENST00000495835 SLC16A3O15427 465 aaKnown RBP25.7■■□□□ 1.7
HLA-C-209ENST00000495835 OAS1P00973 400 aaKnown RBP25.7■■□□□ 1.7
HLA-C-209ENST00000495835 LRRC63Q05C16 580 aa25.7■■□□□ 1.7
HLA-C-209ENST00000495835 GRSF1Q12849 480 aaKnown RBP eCLIP25.7■■□□□ 1.7
HLA-C-209ENST00000495835 TRIM68Q6AZZ1 485 aa25.7■■□□□ 1.7
HLA-C-209ENST00000495835 SPOPLQ6IQ16 392 aa25.7■■□□□ 1.7
HLA-C-209ENST00000495835 KCNK16Q96T55 309 aa25.7■■□□□ 1.7
HLA-C-209ENST00000495835 NIF3L1Q9GZT8 377 aa25.7■■□□□ 1.7
HLA-C-209ENST00000495835 ECT2Q9H8V3 914 aa25.7■■□□□ 1.7
HLA-C-209ENST00000495835 CIZ1Q9ULV3 898 aaPredicted RBP25.7■■□□□ 1.7
HLA-C-209ENST00000495835 AP1G2O75843 785 aa25.69■■□□□ 1.7
HLA-C-209ENST00000495835 DRD1P21728 446 aa25.69■■□□□ 1.7
HLA-C-209ENST00000495835 GAS6Q14393 721 aa25.69■■□□□ 1.7
HLA-C-209ENST00000495835 EML3Q32P44 896 aa25.69■■□□□ 1.7
HLA-C-209ENST00000495835 WDR44Q5JSH3 913 aa25.69■■□□□ 1.7
HLA-C-209ENST00000495835 DDX42Q86XP3 938 aaKnown RBP eCLIP25.69■■□□□ 1.7
HLA-C-209ENST00000495835 SUMF1Q8NBK3 374 aa25.69■■□□□ 1.7
HLA-C-209ENST00000495835 FBXL13Q8NEE6 735 aa25.69■■□□□ 1.7
HLA-C-209ENST00000495835 ELMO3Q96BJ8 720 aa25.69■■□□□ 1.7
HLA-C-209ENST00000495835 HNRNPABQ99729 332 aaKnown RBP25.69■■□□□ 1.7
HLA-C-209ENST00000495835 NT5C1AQ9BXI3 368 aa25.69■■□□□ 1.7
HLA-C-209ENST00000495835 MYH10P35580 1976 aa25.68■■□□□ 1.7
HLA-C-209ENST00000495835 OTOL1A6NHN0 477 aaPredicted RBP25.68■■□□□ 1.7
HLA-C-209ENST00000495835 ARSAP15289 507 aa25.68■■□□□ 1.7
HLA-C-209ENST00000495835 TUBP50607 506 aa25.68■■□□□ 1.7
HLA-C-209ENST00000495835 STIM1Q13586 685 aa25.68■■□□□ 1.7
HLA-C-209ENST00000495835 SLC2A14Q8TDB8 520 aa25.68■■□□□ 1.7
HLA-C-209ENST00000495835 FBXO32Q969P5 355 aa25.68■■□□□ 1.7
HLA-C-209ENST00000495835 RNF38Q9H0F5 515 aa25.68■■□□□ 1.7
HLA-C-209ENST00000495835 FBXO44Q9H4M3 255 aa25.68■■□□□ 1.7
HLA-C-209ENST00000495835 APOBEC3GQ9HC16 384 aaKnown RBP25.68■■□□□ 1.7
HLA-C-209ENST00000495835 PNPLA8Q9NP80 782 aa25.68■■□□□ 1.7
HLA-C-209ENST00000495835 RBM12Q9NTZ6 932 aaKnown RBP25.68■■□□□ 1.7
HLA-C-209ENST00000495835 SLC9A3R1O14745 358 aaPredicted RBP25.67■■□□□ 1.7
HLA-C-209ENST00000495835 ATG13O75143 517 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 NFATC1O95644 943 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 HOXA6P31267 233 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 GJA4P35212 333 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 MXI1P50539 228 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 SLC5A3P53794 718 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 FBXO43Q4G163 708 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 TSSK4Q6SA08 328 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 RUBCNQ92622 972 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 CHFRQ96EP1 664 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 DHTKD1Q96HY7 919 aaPredicted RBP25.67■■□□□ 1.7
HLA-C-209ENST00000495835 EPC1Q9H2F5 836 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 KRT82Q9NSB4 513 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 RAB20Q9NX57 234 aa25.67■■□□□ 1.7
HLA-C-209ENST00000495835 LEFTY2O00292 366 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 PSMA7O14818 248 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 CILPO75339 1184 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 ABL1P00519 1130 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 ZDHHC11BP0C7U3 371 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 ANKRD40Q6AI12 368 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 FOXR2Q6PJQ5 311 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 CCDC26Q8TAB7 109 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 CYFIP2Q96F07 1278 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 SMOQ99835 787 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 MMRN2Q9H8L6 949 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 HMGXB4Q9UGU5 601 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 COQ4Q9Y3A0 265 aa25.66■■□□□ 1.7
HLA-C-209ENST00000495835 WNT6Q9Y6F9 365 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms