RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 VSX1Q9NZR4 365 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-207ENST00000495817 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC39-207ENST00000495817 MAST3O60307 1309 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 COL4A3Q01955 1670 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 SPATA31A3Q5VYP0 1347 aa6.88□□□□□ -1.31
CCDC39-207ENST00000495817 TRGV11A0A075B6L2 103 aa6.88□□□□□ -1.31
CCDC39-207ENST00000495817 TPH1P17752 444 aa6.88□□□□□ -1.31
CCDC39-207ENST00000495817 SERPINF1P36955 418 aa6.88□□□□□ -1.31
CCDC39-207ENST00000495817 ANXA11P50995 505 aaKnown RBP6.88□□□□□ -1.31
CCDC39-207ENST00000495817 RPS7P62081 194 aaKnown RBP6.88□□□□□ -1.31
CCDC39-207ENST00000495817 GEN1Q17RS7 908 aa6.88□□□□□ -1.31
CCDC39-207ENST00000495817 KIAA0408Q6ZU52 694 aa6.88□□□□□ -1.31
CCDC39-207ENST00000495817 LNX2Q8N448 690 aa6.88□□□□□ -1.31
CCDC39-207ENST00000495817 CAVIN3Q969G5 261 aa6.88□□□□□ -1.31
CCDC39-207ENST00000495817 TRIM63Q969Q1 353 aa6.88□□□□□ -1.31
CCDC39-207ENST00000495817 TMEM120AQ9BXJ8 343 aa6.88□□□□□ -1.31
CCDC39-207ENST00000495817 LGALS16A8MUM7 142 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 H7C4K7 107 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 SUN1O94901 812 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 ESRRBO95718 433 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 EGR1P18146 543 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 PTDSS1P48651 473 aaKnown RBP6.87□□□□□ -1.31
CCDC39-207ENST00000495817 PXNP49023 591 aaPredicted RBP6.87□□□□□ -1.31
CCDC39-207ENST00000495817 SEC24CP53992 1094 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 POU5F1BQ06416 359 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 MPP3Q13368 585 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.87□□□□□ -1.31
CCDC39-207ENST00000495817 SLC30A10Q6XR72 485 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 ATG16L2Q8NAA4 619 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 NSUN7Q8NE18 718 aaKnown RBP6.87□□□□□ -1.31
CCDC39-207ENST00000495817 FAM71BQ8TC56 605 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCDC39-207ENST00000495817 MAGEH1Q9H213 219 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 DACT1Q9NYF0 836 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 DNMT3BQ9UBC3 853 aaKnown RBP6.87□□□□□ -1.31
CCDC39-207ENST00000495817 PCDHGB3Q9Y5G1 929 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 CDY1Q9Y6F8 540 aa6.87□□□□□ -1.31
CCDC39-207ENST00000495817 RRP9O43818 475 aaKnown RBP6.86□□□□□ -1.31
CCDC39-207ENST00000495817 ZFPL1O95159 310 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 PROZP22891 400 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 DGKEP52429 567 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 ZNF134P52741 427 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 LILRA4P59901 499 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 KRT17Q04695 432 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 HLXQ14774 488 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-207ENST00000495817 MAPKAPK3Q16644 382 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 ZNF750Q32MQ0 723 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 MZT2AQ6P582 158 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 EID2BQ96D98 161 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 PTCD3Q96EY7 689 aaKnown RBP6.86□□□□□ -1.31
CCDC39-207ENST00000495817 NELL2Q99435 816 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 AGAP2Q99490 1192 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 PAGR1Q9BTK6 254 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 PTDSS2Q9BVG9 487 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 ZBTB26Q9HCK0 441 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 INTS13Q9NVM9 706 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 GTF2A1LQ9UNN4 478 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 TBC1D30Q9Y2I9 924 aa6.86□□□□□ -1.31
CCDC39-207ENST00000495817 EPN1Q9Y6I3 576 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-207ENST00000495817 ACKR2O00590 384 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 ITGA5P08648 1049 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 VEGFAP15692 232 aaPredicted RBP6.85□□□□□ -1.31
CCDC39-207ENST00000495817 CHRM3P20309 590 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 ITGALP20701 1170 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 PPIFP30405 207 aaKnown RBP6.85□□□□□ -1.31
CCDC39-207ENST00000495817 INHBEP58166 350 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 PPFIA1Q13136 1202 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 DYRK1AQ13627 763 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 SLC5A9Q2M3M2 681 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 ZIK1Q3SY52 487 aaPredicted RBP6.85□□□□□ -1.31
CCDC39-207ENST00000495817 PREPLQ4J6C6 727 aaPredicted RBP6.85□□□□□ -1.31
CCDC39-207ENST00000495817 SFRP4Q6FHJ7 346 aaPredicted RBP6.85□□□□□ -1.31
CCDC39-207ENST00000495817 MRNIPQ6NTE8 343 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 CRTC1Q6UUV9 634 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 ZNF280BQ86YH2 543 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 BPIFB1Q8TDL5 484 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 IPO4Q8TEX9 1081 aaKnown RBP6.85□□□□□ -1.31
CCDC39-207ENST00000495817 SNX19Q92543 992 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 TMEM125Q96AQ2 219 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 TBC1D20Q96BZ9 403 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 Q96MF0 132 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 UBA5Q9GZZ9 404 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 SMOC2Q9H3U7 446 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 CASS4Q9NQ75 786 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 KCTD5Q9NXV2 234 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 LRFN1Q9P244 771 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 IGSF9Q9P2J2 1179 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 GRHPRQ9UBQ7 328 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 ZMYND8Q9ULU4 1186 aaPredicted RBP6.85□□□□□ -1.31
CCDC39-207ENST00000495817 CA14Q9ULX7 337 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 GPR52Q9Y2T5 361 aa6.85□□□□□ -1.31
CCDC39-207ENST00000495817 TOR1BO14657 336 aa6.84□□□□□ -1.31
CCDC39-207ENST00000495817 DHRS4L1P0CG22 281 aa6.84□□□□□ -1.31
CCDC39-207ENST00000495817 SRGNP10124 158 aa6.84□□□□□ -1.31
CCDC39-207ENST00000495817 KCNA3P22001 575 aa6.84□□□□□ -1.31
CCDC39-207ENST00000495817 ITGA8P53708 1063 aa6.84□□□□□ -1.31
CCDC39-207ENST00000495817 POLE2P56282 527 aa6.84□□□□□ -1.31
CCDC39-207ENST00000495817 COL10A1Q03692 680 aa6.84□□□□□ -1.31
CCDC39-207ENST00000495817 MYO1EQ12965 1108 aa6.84□□□□□ -1.31
CCDC39-207ENST00000495817 ERCC6LQ2NKX8 1250 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms