RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 ZMYND10O75800 440 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 LCA5LO95447 670 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 FTLP02792 175 aaPredicted RBP20.53■□□□□ 0.88
ATG3-208ENST00000495756 SLC5A3P53794 718 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 EPHB3P54753 998 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 RAB41Q5JT25 222 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 PPM1LQ5SGD2 360 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 DENND5BQ6ZUT9 1274 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 NUP93Q8N1F7 819 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 MSANTD4Q8NCY6 345 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 STKLD1Q8NE28 680 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 ZNF830Q96NB3 372 aaPredicted RBP20.53■□□□□ 0.88
ATG3-208ENST00000495756 ISCUQ9H1K1 167 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 KCNF1Q9H3M0 494 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 SYNCQ9H7C4 482 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 LRRC4Q9HBW1 653 aa20.53■□□□□ 0.88
ATG3-208ENST00000495756 SLC38A8A6NNN8 435 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 EIF3CLB5ME19 914 aaKnown RBP20.52■□□□□ 0.88
ATG3-208ENST00000495756 E5RJQ4 531 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 PIK3R2O00459 728 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 RFPL2O75678 378 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 LRG1P02750 347 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 HOXA9P31269 272 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 ACADSBP45954 432 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 TKTL1P51854 596 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 VEPH1Q14D04 833 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 TMEM184AQ6ZMB5 413 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 MMS22LQ6ZRQ5 1243 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 MON1BQ7L1V2 547 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 DNAAF5Q86Y56 855 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 DEFB123Q8N688 67 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 SCAMP5Q8TAC9 235 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 IPO4Q8TEX9 1081 aaKnown RBP20.52■□□□□ 0.88
ATG3-208ENST00000495756 CASP10Q92851 521 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 EIF3CQ99613 913 aaKnown RBP20.52■□□□□ 0.88
ATG3-208ENST00000495756 CDX2Q99626 313 aaPredicted RBP20.52■□□□□ 0.88
ATG3-208ENST00000495756 ADAM22Q9P0K1 906 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 TJP2Q9UDY2 1190 aa20.52■□□□□ 0.88
ATG3-208ENST00000495756 GLP2RO95838 553 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 ERBB2P04626 1255 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 HNRNPA1P09651 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
ATG3-208ENST00000495756 LCP1P13796 627 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 GABRB2P47870 512 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 SNX16P57768 344 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 C1QBPQ07021 282 aaKnown RBP20.51■□□□□ 0.87
ATG3-208ENST00000495756 ADIGQ0VDE8 80 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 PTP4A2Q12974 167 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 MTMR3Q13615 1198 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 SPA17Q15506 151 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 C2CD6Q53TS8 623 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 SIX6OS1Q8N1H7 587 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 MYLIPQ8WY64 445 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 C18orf8Q96DM3 657 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 C11orf70Q9BRQ4 267 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 DZANK1Q9NVP4 752 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 ZDHHC7Q9NXF8 308 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 IL37Q9NZH6 218 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 USP3Q9Y6I4 520 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 GREB1Q4ZG55 1949 aa20.51■□□□□ 0.87
ATG3-208ENST00000495756 LINC01565O15544 149 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 RTN3O95197 1032 aaPredicted RBP20.5■□□□□ 0.87
ATG3-208ENST00000495756 IPO7O95373 1038 aaKnown RBP20.5■□□□□ 0.87
ATG3-208ENST00000495756 SRGAP2BP0DMP2 458 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 USP46P62068 366 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 ADAM15Q13444 863 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 CYP4A22Q5TCH4 519 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 DNAJB7Q7Z6W7 309 aaPredicted RBP20.5■□□□□ 0.87
ATG3-208ENST00000495756 ITIH5Q86UX2 942 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 SCUBE3Q8IX30 993 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 MCOLN2Q8IZK6 566 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 VCPIP1Q96JH7 1222 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 GUCD1Q96NT3 240 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 MIS12Q9H081 205 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 ASB3Q9Y575 518 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 EYSQ5T1H1 3165 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 SPDYE4A6NLX3 237 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 CCL16O15467 120 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 PAPSS1O43252 624 aaPredicted RBP20.5■□□□□ 0.87
ATG3-208ENST00000495756 NCK2O43639 380 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 CALB1P05937 261 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 CSH1P0DML2 217 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 CSH2P0DML3 217 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 HMGA1P17096 107 aaKnown RBP20.5■□□□□ 0.87
ATG3-208ENST00000495756 IFRD2Q12894 506 aaPredicted RBP20.5■□□□□ 0.87
ATG3-208ENST00000495756 C10orf76Q5T2E6 689 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 TOGARAM2Q6ZUX3 1019 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 MICALL1Q8N3F8 863 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 PSMG2Q969U7 264 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 TTLL2Q9BWV7 592 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 ULBP1Q9BZM6 244 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 FBXO44Q9H4M3 255 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 SFXN1Q9H9B4 322 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 CNGB3Q9NQW8 809 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 COMMD8Q9NX08 183 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 EHD2Q9NZN4 543 aa20.5■□□□□ 0.87
ATG3-208ENST00000495756 FBXO21O94952 628 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 ZBED1O96006 694 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 YWHAQP27348 245 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 GALCP54803 685 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 TAF12Q16514 161 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms