RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 TXNDC8Q6A555 127 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 PIGZQ86VD9 579 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 SLC47A2Q86VL8 602 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 FAM71AQ8IYT1 594 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 ZNF606Q8WXB4 792 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 FGF14Q92915 247 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 KHSRPQ92945 711 aaKnown RBP eCLIP20.53■□□□□ 0.88
HDAC4-212ENST00000495497 FBXO32Q969P5 355 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 RPP25Q9BUL9 199 aaKnown RBP20.53■□□□□ 0.88
HDAC4-212ENST00000495497 SLC46A2Q9BY10 475 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 GDE1Q9NZC3 331 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 IFNKQ9P0W0 207 aa20.53■□□□□ 0.88
HDAC4-212ENST00000495497 CHORDC1Q9UHD1 332 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-212ENST00000495497 ZFP37Q9Y6Q3 630 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-212ENST00000495497 F8VZ95 297 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 RFX1P22670 979 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 UBASH3AP57075 661 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 BST2Q10589 180 aaKnown RBP20.52■□□□□ 0.88
HDAC4-212ENST00000495497 PKDCCQ504Y2 493 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 DENND1BQ6P3S1 775 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 MAB21L3Q8N8X9 362 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 SECISBP2LQ93073 1101 aaKnown RBP20.52■□□□□ 0.88
HDAC4-212ENST00000495497 KCNK12Q9HB15 430 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 TRPC7Q9HCX4 862 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 IL37Q9NZH6 218 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 MUTYHQ9UIF7 546 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 NUMBLQ9Y6R0 609 aa20.52■□□□□ 0.88
HDAC4-212ENST00000495497 ABL1P00519 1130 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 PGFP49763 221 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 RGS7P49802 495 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 KIF11P52732 1056 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 JAM2P57087 298 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 HTR4Q13639 388 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 STILQ15468 1287 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 TANGO2Q6ICL3 276 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 ZSCAN18Q8TBC5 510 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-212ENST00000495497 MRPS31Q92665 395 aaKnown RBP20.51■□□□□ 0.87
HDAC4-212ENST00000495497 ASB16Q96NS5 453 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 CYP2S1Q96SQ9 504 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 KXD1Q9BQD3 176 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 PLA2G2FQ9BZM2 168 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 SMG9Q9H0W8 520 aaKnown RBP20.51■□□□□ 0.87
HDAC4-212ENST00000495497 SMOC2Q9H3U7 446 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 TASP1Q9H6P5 420 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 EHD2Q9NZN4 543 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 TRPM5Q9NZQ8 1165 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 GMIPQ9P107 970 aa20.51■□□□□ 0.87
HDAC4-212ENST00000495497 C2orf78A6NCI8 922 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 ANHXE9PGG2 379 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 XPO1O14980 1071 aaKnown RBP20.5■□□□□ 0.87
HDAC4-212ENST00000495497 GFPT2O94808 682 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 FCARP24071 287 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 VIPR2P41587 438 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 SLC8A3P57103 927 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 PTK2Q05397 1052 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 PMF1Q6P1K2 205 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 GAS2L3Q86XJ1 694 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 SLITRK1Q96PX8 696 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 SPAG5Q96R06 1193 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 SLC22A12Q96S37 553 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 UBXN6Q9BZV1 441 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 PNPLA8Q9NP80 782 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 COMMD8Q9NX08 183 aa20.5■□□□□ 0.87
HDAC4-212ENST00000495497 DOCK8Q8NF50 2099 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 A0A1W2PQC6 194 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 FAM92AA1XBS5 289 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 ZNF840PA6NDX5 716 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 PIK3R2O00459 728 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 MED7O43513 233 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 SETSIPP0DME0 302 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 PLA2G4AP47712 749 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 RAB41Q5JT25 222 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 MON1AQ86VX9 555 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 PASD1Q8IV76 773 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 ARID3BQ8IVW6 561 aaPredicted RBP20.49■□□□□ 0.87
HDAC4-212ENST00000495497 SLC35F5Q8WV83 523 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 NDRG1Q92597 394 aaKnown RBP20.49■□□□□ 0.87
HDAC4-212ENST00000495497 SMARCD2Q92925 531 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 RSPRY1Q96DX4 576 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 RBSNQ9H1K0 784 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 FBXO44Q9H4M3 255 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 CYTH4Q9UIA0 394 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 NCANO14594 1321 aa20.49■□□□□ 0.87
HDAC4-212ENST00000495497 GABBR2O75899 941 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 PRAMEF12O95522 483 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 USP17L7P0C7H9 530 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 LCP1P13796 627 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 CYP11B1P15538 503 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 SOX5P35711 763 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 GPD2P43304 727 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 TKTL1P51854 596 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 TAF3Q5VWG9 929 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 MTSS1LQ765P7 747 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 CACNA2D4Q7Z3S7 1137 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 CMTM8Q8IZV2 173 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 ARL14EPQ8N8R7 260 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-212ENST00000495497 XPO4Q9C0E2 1151 aaKnown RBP20.48■□□□□ 0.87
HDAC4-212ENST00000495497 IGSF9Q9P2J2 1179 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 SCML2Q9UQR0 700 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 USP3Q9Y6I4 520 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms