RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	CDK16	Q00536	496 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	CNTN2	Q02246	1040 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	KLC1	Q07866	573 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	MMRN1	Q13201	1228 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	MDH1B	Q5I0G3	518 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ZPBP2	Q6X784	338 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	IGDCC3	Q8IVU1	814 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	NLRP4	Q96MN2	994 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	CPXM1	Q96SM3	734 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	TMEM134	Q9H6X4	195 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	PPARGC1A	Q9UBK2	798 aa	Known RBP	14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	LNPEP	Q9UIQ6	1025 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071		M0QYV0	167 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	TRAFD1	O14545	582 aa	Predicted RBP	14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SERPINB4	P48594	390 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SURF1	Q15526	300 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ARHGAP24	Q8N264	748 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	MARCO	Q9UEW3	520 aa	Predicted RBP	14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	EFR3B	Q9Y2G0	817 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	MAD1L1	Q9Y6D9	718 aa		14.02	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ADGRA2	Q96PE1	1338 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	FAM237B	A0A1B0GVD1	139 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	KRT36	O76013	467 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	KRT37	O76014	449 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	VHL	P40337	213 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	LGSN	Q5TDP6	509 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SNX30	Q5VWJ9	437 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	FAM160B1	Q5W0V3	765 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SAMD7	Q7Z3H4	446 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	TTC7B	Q86TV6	843 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	KIAA0319L	Q8IZA0	1049 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	PPP1R14C	Q8TAE6	165 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	PRR11	Q96HE9	360 aa	Predicted RBP	14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	TEPSIN	Q96N21	525 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	RILP	Q96NA2	401 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	WDR83	Q9BRX9	315 aa	Known RBP	14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	PCDHGC3	Q9UN70	934 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	C3orf70	A6NLC5	250 aa	Predicted RBP	14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SMAP	O00193	183 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	FCHO1	O14526	889 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	GSC2	O15499	205 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	KCNN4	O15554	427 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	FAM155B	O75949	473 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	PGM1	P36871	562 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	DCAF15	Q66K64	600 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ARFGAP1	Q8N6T3	406 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ENDOV	Q8N8Q3	282 aa	Known RBP	14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	RSAD1	Q9HA92	442 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	KANSL3	Q9P2N6	904 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	NUMBL	Q9Y6R0	609 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	LIN7A	O14910	233 aa	Predicted RBP	14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	GRAP2	O75791	330 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ENO1	P06733	434 aa	Known RBP	14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	MRPS35	P82673	323 aa	Known RBP	14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	TMEM154	Q6P9G4	183 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	FAM161B	Q96MY7	647 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SRPK1	Q96SB4	655 aa	Known RBP	14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ASNSD1	Q9NWL6	643 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	WDR35	Q9P2L0	1181 aa		14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ZC3H7B	Q9UGR2	993 aa	Known RBP	14.01	□□□□□ -0.17
SUPT20H-222	ENST00000495071	PRPSAP2	O60256	369 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	APRT	P07741	180 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SKI	P12755	728 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	FSTL1	Q12841	308 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	PRKG1	Q13976	671 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	CCDC142	Q17RM4	750 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	OR6B2	Q6IFH4	312 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ANO7	Q6IWH7	933 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	UBR7	Q8N806	425 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	CEP120	Q8N960	986 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SMC1B	Q8NDV3	1235 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	OXNAD1	Q96HP4	312 aa	Predicted RBP	14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	HEXIM2	Q96MH2	286 aa	Known RBP	14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	NMRK1	Q9NWW6	199 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	MYH9	P35579	1960 aa	Known RBP	14	□□□□□ -0.17
SUPT20H-222	ENST00000495071		B2RBV5	119 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071		H3BRJ5	948 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ERBB2	P04626	1255 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	STIP1	P31948	543 aa	Known RBP	14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ASPA	P45381	313 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	C6orf163	Q5TEZ5	329 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ARID3B	Q8IVW6	561 aa	Predicted RBP	14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	UBA3	Q8TBC4	463 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SLC44A1	Q8WWI5	657 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	MECR	Q9BV79	373 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	CYTH4	Q9UIA0	394 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	RPL26L1	Q9UNX3	145 aa	Known RBP	14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	GJA3	Q9Y6H8	435 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071		E7ESA3	106 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ZBED1	O96006	694 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	IRX4	P78413	519 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	THOC5	Q13769	683 aa	Known RBP	14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	BMPR2	Q13873	1038 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	TFDP2	Q14188	446 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	CTC1	Q2NKJ3	1217 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SPDYA	Q5MJ70	313 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	RINL	Q6ZS11	566 aa		14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	ALYREF	Q86V81	257 aa	Known RBP	14	□□□□□ -0.17
SUPT20H-222	ENST00000495071	SLC26A11	Q86WA9	606 aa		14	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms