RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TAF10Q12962 218 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 ELF2Q15723 593 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 CCDC6Q16204 474 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 FOXD4L5Q5VV16 416 aaPredicted RBP24.73■■□□□ 1.55
COL27A1-208ENST00000494780 FILIP1Q7Z7B0 1213 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 B3GALNT2Q8NCR0 500 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 USP33Q8TEY7 942 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 FOXD4L4Q8WXT5 416 aaPredicted RBP24.73■■□□□ 1.55
COL27A1-208ENST00000494780 B3GNT5Q9BYG0 378 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 DUSP15Q9H1R2 295 aaPredicted RBP24.73■■□□□ 1.55
COL27A1-208ENST00000494780 VRTNQ9H8Y1 702 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 NXF1Q9UBU9 619 aaKnown RBP24.73■■□□□ 1.55
COL27A1-208ENST00000494780 CPQQ9Y646 472 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 TPRP12270 2363 aaKnown RBP24.72■■□□□ 1.55
COL27A1-208ENST00000494780 PHACTR2O75167 634 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 RHOBTB1O94844 696 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 ABL1P00519 1130 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 ZSCAN22P10073 491 aaPredicted RBP24.72■■□□□ 1.55
COL27A1-208ENST00000494780 CACNA2D1P54289 1103 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 GAB4Q2WGN9 574 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 RESP18Q5W5W9 173 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 DDX42Q86XP3 938 aaKnown RBP eCLIP24.72■■□□□ 1.55
COL27A1-208ENST00000494780 ADGRG2Q8IZP9 1017 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 NUP93Q8N1F7 819 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 TSTD1Q8NFU3 115 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 GOLGA5Q8TBA6 731 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 VPS45Q9NRW7 570 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 TMEM30AQ9NV96 361 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 PCDHA7Q9UN72 937 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 MYO16Q9Y6X6 1858 aa24.72■■□□□ 1.55
COL27A1-208ENST00000494780 K7EQS6 105 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 RTN3O95197 1032 aaPredicted RBP24.71■■□□□ 1.55
COL27A1-208ENST00000494780 F13A1P00488 732 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 CYP17A1P05093 508 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 YWHAQP27348 245 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 MPLP40238 635 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 AFMP43652 599 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 ME1P48163 572 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 AP3M2P53677 418 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 CUL4BQ13620 913 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 ATL3Q6DD88 541 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 PDZD8Q8NEN9 1154 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 OVCA2Q8WZ82 227 aa24.71■■□□□ 1.55
COL27A1-208ENST00000494780 ACACBO00763 2458 aa24.7■■□□□ 1.54
COL27A1-208ENST00000494780 ATP8B3O60423 1300 aa24.7■■□□□ 1.54
COL27A1-208ENST00000494780 CLDN5O00501 218 aa24.7■■□□□ 1.54
COL27A1-208ENST00000494780 DGKEP52429 567 aa24.7■■□□□ 1.54
COL27A1-208ENST00000494780 IFRD2Q12894 506 aaPredicted RBP24.7■■□□□ 1.54
COL27A1-208ENST00000494780 BIRC3Q13489 604 aa24.7■■□□□ 1.54
COL27A1-208ENST00000494780 DHCR24Q15392 516 aa24.7■■□□□ 1.54
COL27A1-208ENST00000494780 FOXD4L6Q3SYB3 417 aaPredicted RBP24.7■■□□□ 1.54
COL27A1-208ENST00000494780 FOXD4L3Q6VB84 417 aaPredicted RBP24.7■■□□□ 1.54
COL27A1-208ENST00000494780 PLEKHO2Q8TD55 490 aa24.7■■□□□ 1.54
COL27A1-208ENST00000494780 RXFP3Q9NSD7 469 aa24.7■■□□□ 1.54
COL27A1-208ENST00000494780 SMPD4Q9NXE4 827 aa24.7■■□□□ 1.54
COL27A1-208ENST00000494780 CFAP97Q9P2B7 532 aa24.7■■□□□ 1.54
COL27A1-208ENST00000494780 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.69■■□□□ 1.54
COL27A1-208ENST00000494780 TM4SF5O14894 197 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 DCLK1O15075 740 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 MBL2P11226 248 aaPredicted RBP24.69■■□□□ 1.54
COL27A1-208ENST00000494780 EIF2DP41214 584 aaKnown RBP24.69■■□□□ 1.54
COL27A1-208ENST00000494780 CASP4P49662 377 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 SEC13P55735 322 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 CLDN10P78369 228 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 ZNF699Q32M78 642 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 C2orf27AQ580R0 203 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 ZNF667Q5HYK9 610 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 STPG1Q5TH74 334 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 C11orf74Q86VG3 221 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 CEP57L1Q8IYX8 460 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 PARD3BQ8TEW8 1205 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 FBXO32Q969P5 355 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 TNIP3Q96KP6 325 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 SMYD3Q9H7B4 428 aa24.69■■□□□ 1.54
COL27A1-208ENST00000494780 MRPS21P82921 87 aaKnown RBP24.68■■□□□ 1.54
COL27A1-208ENST00000494780 USP39Q53GS9 565 aaKnown RBP24.68■■□□□ 1.54
COL27A1-208ENST00000494780 RASSF3Q86WH2 238 aa24.68■■□□□ 1.54
COL27A1-208ENST00000494780 TMEM174Q8WUU8 243 aa24.68■■□□□ 1.54
COL27A1-208ENST00000494780 SMOC1Q9H4F8 434 aa24.68■■□□□ 1.54
COL27A1-208ENST00000494780 TBC1D14Q9P2M4 693 aa24.68■■□□□ 1.54
COL27A1-208ENST00000494780 CFAP45Q9UL16 551 aa24.68■■□□□ 1.54
COL27A1-208ENST00000494780 MMP17Q9ULZ9 603 aa24.68■■□□□ 1.54
COL27A1-208ENST00000494780 EPG5Q9HCE0 2579 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 LRRIQ3A6PVS8 624 aaPredicted RBP24.67■■□□□ 1.54
COL27A1-208ENST00000494780 ADH1CP00326 375 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 C4BPAP04003 597 aaKnown RBP24.67■■□□□ 1.54
COL27A1-208ENST00000494780 CDH8P55286 799 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 NCOA4Q13772 614 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 RHBDF2Q6PJF5 856 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 FAM35AQ86V20 835 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 SLC9A9Q8IVB4 645 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 GRAMD1CQ8IYS0 662 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 CNOT6LQ96LI5 555 aaKnown RBP24.67■■□□□ 1.54
COL27A1-208ENST00000494780 KCNK16Q96T55 309 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 PNKPQ96T60 521 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 MED10Q9BTT4 135 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 DMAP1Q9NPF5 467 aaPredicted RBP24.67■■□□□ 1.54
COL27A1-208ENST00000494780 DMAC2Q9NW81 257 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 COMMD8Q9NX08 183 aa24.67■■□□□ 1.54
COL27A1-208ENST00000494780 IL37Q9NZH6 218 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms