RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 PDCD4Q53EL6 469 aaKnown RBP7.08□□□□□ -1.28
SMC2-205ENST00000493955 RAB11FIP2Q7L804 512 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 CIR1Q86X95 450 aaPredicted RBP7.08□□□□□ -1.28
SMC2-205ENST00000493955 HERC6Q8IVU3 1022 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMC2-205ENST00000493955 CPT1CQ8TCG5 803 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 ABHD5Q8WTS1 349 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 HERVK_113Q902F9 699 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 TAF1DQ9H5J8 278 aaPredicted RBP7.08□□□□□ -1.28
SMC2-205ENST00000493955 WASH6PQ9NQA3 447 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 IFT80Q9P2H3 777 aaPredicted RBP7.08□□□□□ -1.28
SMC2-205ENST00000493955 CHST2Q9Y4C5 530 aa7.08□□□□□ -1.28
SMC2-205ENST00000493955 PLATP00750 562 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 CSF1RP07333 972 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 HGFP14210 728 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 KLRK1P26718 216 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 CD6P30203 668 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 PRKAR1BP31321 381 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 AKT1P31749 480 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 NPTX2P47972 431 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 MAN2A2P49641 1150 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 PGDP52209 483 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 RPS7P62081 194 aaKnown RBP7.07□□□□□ -1.28
SMC2-205ENST00000493955 G3BP1Q13283 466 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMC2-205ENST00000493955 CUL4BQ13620 913 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 CCNIQ14094 377 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 TBC1D10BQ4KMP7 808 aaPredicted RBP7.07□□□□□ -1.28
SMC2-205ENST00000493955 RETSATQ6NUM9 610 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 RINT1Q6NUQ1 792 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 Q6ZRM9 215 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 RSRC2Q7L4I2 434 aaKnown RBP7.07□□□□□ -1.28
SMC2-205ENST00000493955 ADGRG5Q8IZF4 528 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 ESX1Q8N693 406 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 MBD3L2Q8NHZ7 208 aaPredicted RBP7.07□□□□□ -1.28
SMC2-205ENST00000493955 AFG1LQ8WV93 481 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 TMEM171Q8WVE6 324 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 SNX19Q92543 992 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 KRTAP4-5Q9BYR2 181 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 UNC45AQ9H3U1 944 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 SWAP70Q9UH65 585 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 SLC13A4Q9UKG4 626 aa7.07□□□□□ -1.28
SMC2-205ENST00000493955 F5H697 171 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 H0Y3Z8 333 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 GPR42O15529 346 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 ZSCAN9O15535 394 aaPredicted RBP7.06□□□□□ -1.28
SMC2-205ENST00000493955 RPS6KA4O75676 772 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 COMTP21964 271 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 BDNFP23560 247 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 CASP2P42575 452 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 BTBD16Q32M84 506 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 CD300EQ496F6 205 aaPredicted RBP7.06□□□□□ -1.28
SMC2-205ENST00000493955 RBM20Q5T481 1227 aaKnown RBP7.06□□□□□ -1.28
SMC2-205ENST00000493955 NFRKBQ6P4R8 1299 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 LRRC55Q6ZSA7 311 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 MICALCLQ6ZW33 695 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 GDF7Q7Z4P5 450 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 CPOQ8IVL8 374 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 ZNF808Q8N4W9 903 aaPredicted RBP7.06□□□□□ -1.28
SMC2-205ENST00000493955 OR6Y1Q8NGX8 325 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 SDCCAG3Q96C92 435 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 TRAPPC9Q96Q05 1148 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 HIST1H2AAQ96QV6 131 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 DAPP1Q9UN19 280 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 TMEM98Q9Y2Y6 226 aa7.06□□□□□ -1.28
SMC2-205ENST00000493955 PNMA6EA0A0J9YXQ4 647 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 MYADML2A6NDP7 307 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 TISP43B9A030 160 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 TRIM24O15164 1050 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 HOXC11O43248 304 aaPredicted RBP7.05□□□□□ -1.28
SMC2-205ENST00000493955 TRIAP1O43715 76 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 MBD4O95243 580 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 TK1P04183 234 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 ELANEP08246 267 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 JUPP14923 745 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 XBP1P17861 261 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 RBL1P28749 1068 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 MAN1A1P33908 653 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 AARSP49588 968 aaKnown RBP eCLIP7.05□□□□□ -1.28
SMC2-205ENST00000493955 PDE6CP51160 858 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 ACTR2P61160 394 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 TLE2Q04725 743 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 TUBB3Q13509 450 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 GRM4Q14833 912 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 ZNF124Q15973 351 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 TRIM60Q495X7 471 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 FBLN7Q53RD9 439 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 VPS53Q5VIR6 699 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 ICE2Q659A1 982 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 TTC30AQ86WT1 665 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 FAM109AQ8N4B1 249 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 WDR60Q8WVS4 1066 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 TMEM125Q96AQ2 219 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 FAM89AQ96GI7 184 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 OSBPL9Q96SU4 736 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 NUDT22Q9BRQ3 303 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 SLC26A6Q9BXS9 759 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 FSCN3Q9NQT6 498 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 TRPM5Q9NZQ8 1165 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 SERTAD3Q9UJW9 196 aa7.05□□□□□ -1.28
SMC2-205ENST00000493955 SSX2IPQ9Y2D8 614 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms