RNA–Protein interactions for RNA: ENST00000493638.1

SRPK2-215, Transcript of SRSF protein kinase 2, human

TSL 3

Gene SRPK2, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRPK2-215	ENST00000493638	FAM86B1	E9PN63	330 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	GRIN2D	O15399	1336 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	SGPL1	O95470	568 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	TFRC	P02786	760 aa	Known RBP	4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	FAM86B2	P0C5J1	330 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	POLR2M	P0CAP2	368 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	MYH6	P13533	1939 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	ADCY7	P51828	1080 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	PRMT2	P55345	433 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	NLRP5	P59047	1200 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	GHRHR	Q02643	423 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	ADAM15	Q13444	863 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	CUL4A	Q13619	759 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	PKP1	Q13835	747 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	PGM5	Q15124	567 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	PKN2	Q16513	984 aa	Known RBP	4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	ARHGEF16	Q5VV41	709 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	MFSD14C	Q5VZR4	134 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	KRT40	Q6A162	431 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	FAM173B	Q6P4H8	233 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	CCDC62	Q6P9F0	684 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	ABHD17C	Q6PCB6	329 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	TMPRSS6	Q8IU80	811 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	RPTOR	Q8N122	1335 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	D2HGDH	Q8N465	521 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	CALML6	Q8TD86	181 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	U2AF1L4	Q8WU68	220 aa	Known RBP	4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	CRYGN	Q8WXF5	182 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	SOCS4	Q8WXH5	440 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	RABGGTA	Q92696	567 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	FERMT2	Q96AC1	680 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	ZBTB10	Q96DT7	871 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	TMEM176A	Q96HP8	235 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	RNF26	Q9BY78	433 aa	Predicted RBP	4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	ZMYND12	Q9H0C1	365 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	RIC8A	Q9NPQ8	531 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	FBXO40	Q9UH90	709 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	FAM184B	Q9ULE4	1060 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	GIT1	Q9Y2X7	761 aa		4.08	□□□□□ -1.76
SRPK2-215	ENST00000493638	PLXNA1	Q9UIW2	1896 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	PFAS	O15067	1338 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	CCDC163	A0A0D9SF12	145 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	CCDC196	A0A1B0GTZ2	297 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	CPLX1	O14810	134 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	SEPT4	O43236	478 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	SLC37A4	O43826	429 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	DEXI	O95424	95 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	TDP2	O95551	362 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	GJB1	P08034	283 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	GJB2	P29033	226 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	TOB1	P50616	345 aa	Predicted RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	RCAN1	P53805	252 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	INHBC	P55103	352 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	PSMC6	P62333	389 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	ATP2C1	P98194	919 aa	Predicted RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	ALDH6A1	Q02252	535 aa	Known RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	TNFAIP2	Q03169	654 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	ARHGAP1	Q07960	439 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	ITGB3BP	Q13352	177 aa	Predicted RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	RIN1	Q13671	783 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	ANKRD1	Q15327	319 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	LRRC41	Q15345	812 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	SMN1	Q16637	294 aa	Known RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	UBE2Q1	Q7Z7E8	422 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	BLID	Q8IZY5	108 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	KLHDC9	Q8NEP7	349 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	NSUN6	Q8TEA1	469 aa	Known RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	AFG1L	Q8WV93	481 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	NEU4	Q8WWR8	484 aa	Predicted RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	LPP	Q93052	612 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	LENG9	Q96B70	501 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	PAWR	Q96IZ0	340 aa	Known RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	DEPDC7	Q96QD5	511 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	PCYT2	Q99447	389 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	DNAJC7	Q99615	494 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	FOXB1	Q99853	325 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	ANO3	Q9BYT9	981 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	TMEM60	Q9H2L4	133 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	MMRN2	Q9H8L6	949 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	SNTG2	Q9NY99	539 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	SEC63	Q9UGP8	760 aa	Known RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	DDX20	Q9UHI6	824 aa	Known RBP	4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	OGDHL	Q9ULD0	1010 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	UBIAD1	Q9Y5Z9	338 aa		4.07	□□□□□ -1.76
SRPK2-215	ENST00000493638	TNRC18	O15417	2968 aa	Predicted RBP	4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	FRMPD4	Q14CM0	1322 aa		4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	SYNRG	Q9UMZ2	1314 aa		4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	IGLV3-22	A0A075B6J6	115 aa		4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	GSTTP1	A0A1W2PQM5	241 aa		4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	CAPN14	A8MX76	684 aa		4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	DDX39A	O00148	427 aa	Known RBP	4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	EIF3J	O75822	258 aa	Known RBP	4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	PEX11B	O96011	259 aa		4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	CCNE2	O96020	404 aa		4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	TXN	P10599	105 aa	Known RBP	4.06	□□□□□ -1.76
SRPK2-215	ENST00000493638	KCNA2	P16389	499 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms