RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 ZFP36P26651 326 aaKnown RBP5.05□□□□□ -1.6
CLIP4-212ENST00000493551 ADD2P35612 726 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 VCPP55072 806 aaKnown RBP5.05□□□□□ -1.6
CLIP4-212ENST00000493551 ELLP55199 621 aaPredicted RBP5.05□□□□□ -1.6
CLIP4-212ENST00000493551 BFSP2Q13515 415 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 BAATQ14032 418 aaPredicted RBP5.05□□□□□ -1.6
CLIP4-212ENST00000493551 GPNMBQ14956 572 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 TTF1Q15361 905 aaPredicted RBP5.05□□□□□ -1.6
CLIP4-212ENST00000493551 PRR16Q569H4 304 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 TSHZ3Q63HK5 1081 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 LRRC8DQ7L1W4 858 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 RPAINQ86UA6 219 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 CXorf67Q86X51 503 aaPredicted RBP5.05□□□□□ -1.6
CLIP4-212ENST00000493551 CERS3Q8IU89 383 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 SSH3Q8TE77 659 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 PUS7LQ9H0K6 701 aaKnown RBP5.05□□□□□ -1.6
CLIP4-212ENST00000493551 SERHL2Q9H4I8 314 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 KCNH7Q9NS40 1196 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 PAG1Q9NWQ8 432 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 CYP39A1Q9NYL5 469 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 FBXO40Q9UH90 709 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 CCPG1Q9ULG6 757 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 FRMD4BQ9Y2L6 1034 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 TANC1Q9C0D5 1861 aa5.05□□□□□ -1.6
CLIP4-212ENST00000493551 TMEM221A6NGB7 291 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 GOLGA6L22H0YM25 854 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 M0R296 226 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 ZNF185O15231 689 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 NMT2O60551 498 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 ARIH2O95376 493 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 GJB5O95377 273 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 ZNF286BP0CG31 522 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 NAT1P18440 290 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 CTNNB1P35222 781 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 ETFBP38117 255 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 TDO2P48775 406 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 CPT1AP50416 773 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 ALDH5A1P51649 535 aaPredicted RBP5.04□□□□□ -1.6
CLIP4-212ENST00000493551 ERVK-21P61565 698 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 TCF15Q12870 199 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 GPM6BQ13491 265 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 PPP2R5BQ15173 497 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 IQSEC1Q6DN90 963 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 SEPT14Q6ZU15 432 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 NOSTRINQ8IVI9 506 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 SUGP1Q8IWZ8 645 aaKnown RBP5.04□□□□□ -1.6
CLIP4-212ENST00000493551 FTSJ3Q8IY81 847 aaKnown RBP5.04□□□□□ -1.6
CLIP4-212ENST00000493551 ZNF444Q8N0Y2 327 aaPredicted RBP5.04□□□□□ -1.6
CLIP4-212ENST00000493551 PHOSPHO2Q8TCD6 241 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 AFG1LQ8WV93 481 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 ATOH1Q92858 354 aaPredicted RBP5.04□□□□□ -1.6
CLIP4-212ENST00000493551 YME1L1Q96TA2 773 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 RAD9AQ99638 391 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 APOL5Q9BWW9 433 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 CAPN10Q9HC96 672 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 ATP8A2Q9NTI2 1148 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 FEM1BQ9UK73 627 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 PCDHA8Q9Y5H6 950 aa5.04□□□□□ -1.6
CLIP4-212ENST00000493551 TET1Q8NFU7 2136 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 COL4A6Q14031 1691 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 CCDC66A2RUB6 948 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 M0R2C6 588 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 SCDO00767 359 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 IPO8O15397 1037 aaKnown RBP5.03□□□□□ -1.6
CLIP4-212ENST00000493551 TBX10O75333 385 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 BAIAP3O94812 1187 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 TOX4O94842 621 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 PDGFBP01127 241 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-212ENST00000493551 JUNP05412 331 aaKnown RBP5.03□□□□□ -1.6
CLIP4-212ENST00000493551 TSPY3P0CV98 308 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 TSPY8P0CW00 308 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 TXNP10599 105 aaKnown RBP5.03□□□□□ -1.6
CLIP4-212ENST00000493551 CKBP12277 381 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 SDHAP31040 664 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 RFC2P35250 354 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 SLC1A4P43007 532 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 STAT2P52630 851 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 ALDH6A1Q02252 535 aaKnown RBP5.03□□□□□ -1.6
CLIP4-212ENST00000493551 LY6KQ17RY6 165 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 USH1GQ495M9 461 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 DUSP28Q4G0W2 176 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 EPC2Q52LR7 807 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 ZNF618Q5T7W0 954 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 YOD1Q5VVQ6 348 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-212ENST00000493551 CEP85Q6P2H3 762 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 ASCL5Q7RTU5 278 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 APBB1IPQ7Z5R6 666 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-212ENST00000493551 ADHFE1Q8IWW8 467 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 PLA2G15Q8NCC3 412 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 NEK9Q8TD19 979 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 PTPRN2Q92932 1015 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 MRPL38Q96DV4 380 aaKnown RBP5.03□□□□□ -1.6
CLIP4-212ENST00000493551 RPGRIP1Q96KN7 1286 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 COQ10AQ96MF6 247 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 CTAGE1Q96RT6 745 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 SPATA5L1Q9BVQ7 753 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 SLC46A2Q9BY10 475 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLIP4-212ENST00000493551 CCSER2Q9H7U1 834 aa5.03□□□□□ -1.6
CLIP4-212ENST00000493551 VTA1Q9NP79 307 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms