RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 KCTD13Q8WZ19 329 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 PKNOX2Q96KN3 472 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 RAD9AQ99638 391 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 SMOQ99835 787 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 TRIM7Q9C029 511 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 CSNK1G1Q9HCP0 422 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 LCMT1Q9UIC8 334 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 SAR1BQ9Y6B6 198 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 NCK2O43639 380 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 AMPD2Q01433 879 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 RPS6KA1Q15418 735 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 PTPROQ16827 1216 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 KIAA1841Q6NSI8 718 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 ZNF771Q7L3S4 317 aaPredicted RBP14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 SCUBE3Q8IX30 993 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 KCNK16Q96T55 309 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 VN1R3Q9BXE9 311 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 UBXN6Q9BZV1 441 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 LRRC4Q9HBW1 653 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 ARFGAP3Q9NP61 516 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 DMAP1Q9NPF5 467 aaPredicted RBP14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 IP6K2Q9UHH9 426 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 SNX12Q9UMY4 172 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 PACSIN2Q9UNF0 486 aaPredicted RBP14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 PCDHB12Q9Y5F1 795 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 TRIOBPQ9H2D6 2365 aa14.81□□□□□ -0.04
PDZRN3-210ENST00000492909 CCDC151A5D8V7 595 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 PAPSS1O43252 624 aaPredicted RBP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 TBC1D4O60343 1298 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 GABBR2O75899 941 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 SOD2P04179 222 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 LCP1P13796 627 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 PRLRP16471 622 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 COMTP21964 271 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 RFC1P35251 1148 aaPredicted RBP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 CACNA2D1P54289 1103 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 CFAP221Q4G0U5 840 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 OLFML1Q6UWY5 402 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 ZMIZ2Q8NF64 920 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 PIK3R5Q8WYR1 880 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 FUBP3Q96I24 572 aaKnown RBP eCLIP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 RHOBTB2Q9BYZ6 727 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 METTL5Q9NRN9 209 aaKnown RBP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 CHST7Q9NS84 486 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 TMEM30AQ9NV96 361 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 HYOU1Q9Y4L1 999 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 PATJQ8NI35 1801 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 SPOPO43791 374 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 TLL1O43897 1013 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 PROSCO94903 275 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 CPB1P15086 417 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 MYOGP15173 224 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 TCP1P17987 556 aaKnown RBP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 SCNN1AP37088 669 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 PBX2P40425 430 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 SLC1A1P43005 524 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 SLC6A3Q01959 620 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 ADIGQ0VDE8 80 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 SMARCB1Q12824 385 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 PRSS55Q6UWB4 352 aaPredicted RBP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 DDX53Q86TM3 631 aaKnown RBP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 FNIP1Q8TF40 1166 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 RIN2Q8WYP3 895 aaPredicted RBP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 CLP1Q92989 425 aaKnown RBP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 HES6Q96HZ4 224 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 ABI2Q9NYB9 513 aaPredicted RBP14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 MTRRQ9UBK8 725 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 RAB21Q9UL25 225 aa14.8□□□□□ -0.04
PDZRN3-210ENST00000492909 MIF4GDA9UHW6 222 aaKnown RBP14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 SASH3O75995 380 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 GLUD2P49448 558 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 DNA2P51530 1060 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 ARPP19P56211 112 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 GPR17Q13304 367 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 PIGHQ14442 188 aaPredicted RBP14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 PSMD5Q16401 504 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 SIX6OS1Q8N1H7 587 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 FBXO22Q8NEZ5 403 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 JOSD2Q8TAC2 188 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 SP7Q8TDD2 431 aaPredicted RBP14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 HNRNPLLQ8WVV9 542 aaKnown RBP14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 PIWIL1Q96J94 861 aaKnown RBP14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 OSBPL9Q96SU4 736 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 HERC2P3Q9BVR0 1158 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 ANKZF1Q9H8Y5 726 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 PNPLA8Q9NP80 782 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 STK39Q9UEW8 545 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 PCDHB5Q9Y5E4 795 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 BACE2Q9Y5Z0 518 aa14.79□□□□□ -0.04
PDZRN3-210ENST00000492909 HHLA1C9JL84 531 aa14.78□□□□□ -0.04
PDZRN3-210ENST00000492909 F8VP50 259 aa14.78□□□□□ -0.04
PDZRN3-210ENST00000492909 SOX1O00570 391 aaPredicted RBP14.78□□□□□ -0.04
PDZRN3-210ENST00000492909 SRGAP2O75044 1071 aa14.78□□□□□ -0.04
PDZRN3-210ENST00000492909 LINC00271P0C7V0 271 aa14.78□□□□□ -0.04
PDZRN3-210ENST00000492909 CYP2F1P24903 491 aa14.78□□□□□ -0.04
PDZRN3-210ENST00000492909 MAN1A1P33908 653 aa14.78□□□□□ -0.04
PDZRN3-210ENST00000492909 GRIK1P39086 918 aa14.78□□□□□ -0.04
PDZRN3-210ENST00000492909 TKTL1P51854 596 aa14.78□□□□□ -0.04
PDZRN3-210ENST00000492909 RNASE9P60153 205 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms