RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	DFNA5	O60443	496 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	DGAT1	O75907	488 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	GJB6	O95452	261 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	CKMT2	P17540	419 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	RBMS1	P29558	406 aa	Known RBP	5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	DCT	P40126	519 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	CASR	P41180	1078 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	CTSK	P43235	329 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	GRIA4	P48058	902 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	ATP2C1	P98194	919 aa	Predicted RBP	5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	CLN3	Q13286	438 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	FAM187B	Q17R55	369 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602		Q4G0T1	1027 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	KCNT1	Q5JUK3	1230 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	OVOS1	Q6IE37	1185 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	ALKAL1	Q6UXT8	129 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	DSTYK	Q6XUX3	929 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	NUDT18	Q6ZVK8	323 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	MAEA	Q7L5Y9	396 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	FILIP1	Q7Z7B0	1213 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	SKAP1	Q86WV1	359 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	SMC5	Q8IY18	1101 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	MB21D2	Q8IYB1	491 aa	Predicted RBP	5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	NAT16	Q8N8M0	369 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	CEP120	Q8N960	986 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	ZNF564	Q8TBZ8	553 aa	Predicted RBP	5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	LRRC15	Q8TF66	581 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	MOCOS	Q96EN8	888 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	SGF29	Q96ES7	293 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	ACOX2	Q99424	681 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	CD248	Q9HCU0	757 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	TM9SF3	Q9HD45	589 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	ITM2C	Q9NQX7	267 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	HCN2	Q9UL51	889 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	MYO18A	Q92614	2054 aa	Known RBP	5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	NF1	P21359	2839 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	STK36	Q9NRP7	1315 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	LEFTY2	O00292	366 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	ACKR2	O00590	384 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	SH2B2	O14492	632 aa	Predicted RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	PRC1	O43663	620 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	TADA3	O75528	432 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	TDP2	O95551	362 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	ADH1C	P00326	375 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	EDN1	P05305	212 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	NFIC	P08651	508 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	CSH1	P0DML2	217 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	CSH2	P0DML3	217 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	ADH5	P11766	374 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	PRKCSH	P14314	528 aa	Predicted RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	HDC	P19113	662 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	GNA11	P29992	359 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	OXTR	P30559	389 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	OXCT1	P55809	520 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	C21orf59	P57076	290 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	IRX6	P78412	446 aa	Predicted RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	SKOR1	P84550	965 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	ZXDB	P98169	803 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	E2F1	Q01094	437 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	CTTN	Q14247	550 aa	Known RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	KCNB1	Q14721	858 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	XKR4	Q5GH76	650 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	C3orf38	Q5JPI3	329 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	FHL5	Q5TD97	284 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	EGFLAM	Q63HQ2	1017 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	RHBDF2	Q6PJF5	856 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	PADI6	Q6TGC4	694 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	ATCAY	Q86WG3	371 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	CHD1L	Q86WJ1	897 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	TMEM130	Q8N3G9	435 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	PHTF2	Q8N3S3	785 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	NSUN7	Q8NE18	718 aa	Known RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	OR10T2	Q8NGX3	314 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	SAP25	Q8TEE9	199 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	SSC4D	Q8WTU2	575 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	DRC1	Q96MC2	740 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	CCDC43	Q96MW1	224 aa	Known RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	DEPDC7	Q96QD5	511 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	ELF4	Q99607	663 aa	Predicted RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	GABRG3	Q99928	467 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	CCDC94	Q9BW85	323 aa	Predicted RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	ZMYND12	Q9H0C1	365 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	ABI2	Q9NYB9	513 aa	Predicted RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	RGL1	Q9NZL6	768 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	USP36	Q9P275	1121 aa	Known RBP	5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	ARHGAP26	Q9UNA1	814 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	PCDHB6	Q9Y5E3	794 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	NAV3	Q8IVL0	2385 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	TMEM131	Q92545	1883 aa		5.81	□□□□□ -1.48
SEC13-219	ENST00000492602	OTOG	Q6ZRI0	2925 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	ANK1	P16157	1881 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	C2orf78	A6NCI8	922 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	WASH3P	C4AMC7	463 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	DIAPH2	O60879	1101 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	TULP3	O75386	442 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	CS	O75390	466 aa	Known RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	HAPLN1	P10915	354 aa	Predicted RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	KCNE1	P15382	129 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	TCF3	P15923	654 aa		5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms