RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 EEF2KMTQ96G04 330 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 MSANTD3Q96H12 275 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 DHTKD1Q96HY7 919 aaPredicted RBP13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 CEP295NLQ96MC4 621 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 KCNK16Q96T55 309 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 RNF38Q9H0F5 515 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 SEMA4AQ9H3S1 761 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 KIF9Q9HAQ2 790 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 APOBEC3GQ9HC16 384 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 FBRSL1Q9HCM7 1045 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 CTNND2Q9UQB3 1225 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 CACNA1AO00555 2505 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 DNAH14Q0VDD8 3507 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 TRAV19A0A0A6YYK7 116 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 HLA-DRAP01903 254 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 RPL13P26373 211 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 VAMP7P51809 220 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 SATB1Q01826 763 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 TYRO3Q06418 890 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 DMWDQ09019 674 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 RUNX3Q13761 415 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 MTF1Q14872 753 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 TPD52L1Q16890 204 aaPredicted RBP13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 SGSM1Q2NKQ1 1148 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 DPCR1Q3MIW9 517 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 FSTL4Q6MZW2 842 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 PKN3Q6P5Z2 889 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 TAS1R2Q8TE23 839 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 TWNKQ96RR1 684 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 ELOVL4Q9GZR5 314 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 THG1LQ9NWX6 298 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 ZSCAN32Q9NX65 697 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 PCDHGA2Q9Y5H1 932 aa13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 HELZP42694 1942 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-206ENST00000491668 PPP1R3GB7ZBB8 358 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 K7ESF4 209 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 TNFRSF10BO14763 440 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 TRIM66O15016 1216 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 BEST1O76090 585 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 OLFM2O95897 454 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 CKMP06732 381 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 USP17L7P0C7H9 530 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 HDCP19113 662 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 GCLMP48507 274 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 STX17P56962 302 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 LRRC63Q05C16 580 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 TAF10Q12962 218 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 ADAM9Q13443 819 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 TMEM196Q5HYL7 178 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 C1orf228Q6PIY5 440 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 ZC3H14Q6PJT7 736 aaKnown RBP13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 ACOT1Q86TX2 421 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 FAM35AQ86V20 835 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 CRYBG2Q8N1P7 616 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 SPEM1Q8N4L4 309 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 ZMIZ2Q8NF64 920 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 SCAMP5Q8TAC9 235 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 SH3RF2Q8TEC5 729 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 EZH1Q92800 747 aaPredicted RBP13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 IER2Q9BTL4 223 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 LINC00597Q9H2U6 94 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 IL37Q9NZH6 218 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 ARHGAP26Q9UNA1 814 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 FRMD4BQ9Y2L6 1034 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 WNT6Q9Y6F9 365 aa13.48□□□□□ -0.25
SEC61A1-206ENST00000491668 TRDMT1O14717 391 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 OAS1P00973 400 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 CCDC130P13994 396 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 TCF3P15923 654 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 ANXA13P27216 316 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 GJA4P35212 333 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 PGFP49763 221 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 NDST1P52848 882 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 ENPEPQ07075 957 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 PDGFRLQ15198 375 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 GAB4Q2WGN9 574 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 EML3Q32P44 896 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 DGKKQ5KSL6 1271 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 ANKRD40Q6AI12 368 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 INTS8Q75QN2 995 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 FAM186BQ8IYM0 893 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 DCLK2Q8N568 766 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 C12orf29Q8N999 325 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 WHAMMQ8TF30 809 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 OSCP1Q8WVF1 389 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 TAF4BQ92750 862 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 SEMA4DQ92854 862 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 SMOQ99835 787 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 ECT2Q9H8V3 914 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 TRPM5Q9NZQ8 1165 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 RWDD2AQ9UIY3 292 aa13.47□□□□□ -0.25
SEC61A1-206ENST00000491668 TRIM49BA6NDI0 452 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 CETN3O15182 167 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 PAPSS2O95340 614 aaPredicted RBP13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 FGFR1OPO95684 399 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms