RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 PROSCO94903 275 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 VAV1P15498 845 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 KRT4P19013 534 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 IVDP26440 423 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 RPL7AP62424 266 aaKnown RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 CYP24A1Q07973 514 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 SMTNL2Q2TAL5 461 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 BBS9Q3SYG4 887 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 SWSAP1Q6NVH7 229 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 GPD1LQ8N335 351 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 C12orf50Q8NA57 414 aaPredicted RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 TMEM161BQ8NDZ6 487 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 RFWD2Q8NHY2 731 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 ZNF75CPQ92670 426 aaPredicted RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 GATA6Q92908 595 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 WRNIP1Q96S55 665 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 MIPEPQ99797 713 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 BTBD10Q9BSF8 475 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 KIAA1586Q9HCI6 787 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 ADGRA3Q8IWK6 1321 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 CDK5RAP2Q96SN8 1893 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 MTA2O94776 668 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 DSG3P32926 999 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 PGM1P36871 562 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 RTP1P59025 263 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 RPS6P62753 249 aaKnown RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 NFX1Q12986 1120 aaKnown RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 CYLC2Q14093 348 aaPredicted RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 RHBDF2Q6PJF5 856 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 SCARA5Q6ZMJ2 495 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 CLNKQ7Z7G1 428 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 TRABD2AQ86V40 505 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 NAT14Q8WUY8 206 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 C10orf82Q8WW14 230 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 NSL1Q96IY1 281 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 FBXO6Q9NRD1 293 aaPredicted RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 DKK3Q9UBP4 350 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 SERPINA10Q9UK55 444 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 CCDC160A6NGH7 325 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 WDR64B1ANS9 1081 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 GSC2O15499 205 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 TCF7P36402 384 aaPredicted RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 GPC3P51654 580 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 ARFIP2P53365 341 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 CAMK2BQ13554 666 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 MOGSQ13724 837 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 CCDC153Q494R4 210 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 MFSD7Q6UXD7 560 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 SYDE1Q6ZW31 735 aaPredicted RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 RIBC1Q8N443 379 aaPredicted RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 ANKK1Q8NFD2 765 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 MCEEQ96PE7 176 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 MRPL47Q9HD33 250 aaKnown RBP10.6□□□□□ -0.71
BRD9-209ENST00000490814 EURLQ9NYK6 297 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 IKBKGQ9Y6K9 419 aa10.6□□□□□ -0.71
BRD9-209ENST00000490814 C2orf71A6NGG8 1288 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 A6NJR5 290 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 ENTPD3O75355 529 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 ADRA1DP25100 572 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 SSTR1P30872 391 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 SLC1A1P43005 524 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 NEK3P51956 506 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 MRPS9P82933 396 aaKnown RBP10.59□□□□□ -0.71
BRD9-209ENST00000490814 TBL3Q12788 808 aaKnown RBP10.59□□□□□ -0.71
BRD9-209ENST00000490814 EFTUD2Q15029 972 aaKnown RBP eCLIP10.59□□□□□ -0.711e-7■■■■■ 28.9
BRD9-209ENST00000490814 CCNG2Q16589 344 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 PDK4Q16654 411 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 C6orf163Q5TEZ5 329 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 FAM160B2Q86V87 743 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 PALM2Q8IXS6 379 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 PYROXD1Q8WU10 500 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 DDX1Q92499 740 aaKnown RBP10.59□□□□□ -0.71
BRD9-209ENST00000490814 TMEM143Q96AN5 459 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 DNAJC1Q96KC8 554 aaKnown RBP10.59□□□□□ -0.71
BRD9-209ENST00000490814 CCT7Q99832 543 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 STRA6Q9BX79 667 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 TRIM55Q9BYV6 548 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 NDEL1Q9GZM8 345 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 GINM1Q9NU53 330 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 ARMCX1Q9P291 453 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 GRID1Q9ULK0 1009 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 TXNDC9O14530 226 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 KDM1AO60341 852 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 PDE5AO76074 875 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 STK10O94804 968 aaKnown RBP10.59□□□□□ -0.71
BRD9-209ENST00000490814 ZWINTO95229 277 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 FDX1P10109 184 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 HSPA8P11142 646 aaKnown RBP10.59□□□□□ -0.71
BRD9-209ENST00000490814 CD19P15391 556 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 TNFAIP1Q13829 316 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 SLC45A4Q5BKX6 768 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 KCNT1Q5JUK3 1230 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 TMEM63BQ5T3F8 832 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 C6orf183Q5T699 404 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 IZUMO2Q6UXV1 221 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 TRIM67Q6ZTA4 783 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 ANKS1BQ7Z6G8 1248 aa10.59□□□□□ -0.71
BRD9-209ENST00000490814 NMD3Q96D46 503 aaKnown RBP10.59□□□□□ -0.71
BRD9-209ENST00000490814 ZBTB45Q96K62 511 aaPredicted RBP10.59□□□□□ -0.71
BRD9-209ENST00000490814 HNRNPABQ99729 332 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms