RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 EPHB3P54753 998 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 HGFACQ04756 655 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 GPS1Q13098 491 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 ATP1A4Q13733 1029 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 BOP1Q14137 746 aaKnown RBP7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 USP10Q14694 798 aaKnown RBP7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 SSPNQ14714 243 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 IQCB1Q15051 598 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 ANKRD1Q15327 319 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 SMAD1Q15797 465 aaKnown RBP7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 TBR1Q16650 682 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 MGAT5BQ3V5L5 792 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 TRIM60Q495X7 471 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 SPECC1Q5M775 1068 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 CCDC129Q6ZRS4 1044 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 ENOSF1Q7L5Y1 443 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 SYT13Q7L8C5 426 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 IGDCC3Q8IVU1 814 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 FITM2Q8N6M3 262 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 AJUBAQ96IF1 538 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 PWWP2AQ96N64 755 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 EPC1Q9H2F5 836 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 ZCCHC4Q9H5U6 513 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 ACAD9Q9H845 621 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 IL23AQ9NPF7 189 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 KCND3Q9UK17 655 aa7.28□□□□□ -1.24
TM9SF3-206ENST00000490192 PNMA6EA0A0J9YXQ4 647 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 B5MCH6 92 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 SPTLC2O15270 562 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 INHBBP09529 407 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 MYCLP12524 364 aaPredicted RBP7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 CSF2RBP32927 897 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 ZIK1Q3SY52 487 aaPredicted RBP7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 ABLIM2Q6H8Q1 611 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 B4GALNT4Q76KP1 1039 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 XYLT1Q86Y38 959 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 FNIP1Q8TF40 1166 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 RNF125Q96EQ8 232 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 FAM227BQ96M60 508 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 GHITMQ9H3K2 345 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 FSCN3Q9NQT6 498 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 FAM30AQ9NZY2 134 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 DNAJC16Q9Y2G8 782 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 CYP46A1Q9Y6A2 500 aa7.27□□□□□ -1.25
TM9SF3-206ENST00000490192 SYNDIG1LA6NDD5 238 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 STX16-NPEPL1H3BU86 382 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 STX16O14662 325 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 RGS10O43665 173 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 STC2O76061 302 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 TMEM63AO94886 807 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 CHMP24386 653 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 ABCD3P28288 659 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 SERPINA4P29622 427 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 STAT1P42224 750 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 NPTX2P47972 431 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 KCNC1P48547 511 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 CCR9P51686 369 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 AFF3P51826 1226 aaKnown RBP7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 RBM5P52756 815 aaKnown RBP eCLIP7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 GALNT2Q10471 571 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 BMT2Q1RMZ1 405 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 FAM214AQ32MH5 1076 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 ZMAT1Q5H9K5 638 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 ATXN7L2Q5T6C5 722 aaPredicted RBP7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 C1QTNF12Q5T7M4 302 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 TMCO3Q6UWJ1 677 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 TTLL10Q6ZVT0 673 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 R3HCC1LQ7Z5L2 792 aaKnown RBP7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 ANKRD23Q86SG2 305 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 ADGRE4PQ86SQ3 457 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 BPIFB1Q8TDL5 484 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 WDR60Q8WVS4 1066 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 CPT1BQ92523 772 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 AP1M1Q9BXS5 423 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 CCDC68Q9H2F9 335 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 PRDM13Q9H4Q3 707 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 NDUFAF4Q9P032 175 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 RAPGEFL1Q9UHV5 662 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 SHOC2Q9UQ13 582 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 CNTN6Q9UQ52 1028 aa7.26□□□□□ -1.25
TM9SF3-206ENST00000490192 TBKBP1A7MCY6 615 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 EFCAB8A8MWE9 144 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 POLRMTO00411 1230 aaKnown RBP7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 ZSCAN9O15535 394 aaPredicted RBP7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 CSF1P09603 554 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 CHRM3P20309 590 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 TOB1P50616 345 aaPredicted RBP7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 CCT4P50991 539 aaKnown RBP7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 LILRA4P59901 499 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 GALNTL6Q49A17 601 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 CFAP58Q5T655 872 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 MFSD4BQ5TF39 518 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 USP38Q8NB14 1042 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 TBC1D22AQ8WUA7 517 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 YTHDC1Q96MU7 727 aaKnown RBP7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 SPATA25Q9BR10 227 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 TLR10Q9BXR5 811 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 PARD6AQ9NPB6 346 aa7.25□□□□□ -1.25
TM9SF3-206ENST00000490192 HAUS2Q9NVX0 235 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms