RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 MAEAQ7L5Y9 396 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 PHTF2Q8N3S3 785 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 OR10T2Q8NGX3 314 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 SH3RF2Q8TEC5 729 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 LIN37Q96GY3 246 aaPredicted RBP7.88□□□□□ -1.15
COL9A1-209ENST00000489861 PNKPQ96T60 521 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 PDRG1Q9NUG6 133 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 HSFX1Q9UBD0 423 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 FTSJ1Q9UET6 329 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 NFE2L3Q9Y4A8 694 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 SNX11Q9Y5W9 270 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 SDK2Q58EX2 2172 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 CKAP5Q14008 2032 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 SPENQ96T58 3664 aaKnown RBP7.88□□□□□ -1.15
COL9A1-209ENST00000489861 SPG11Q96JI7 2443 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 K7ENP7 123 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 ENC1O14682 589 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 KLK10O43240 276 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 PCDHGA12O60330 932 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 RFPL3O75679 317 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 SLITRK3O94933 977 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 HOXB2P14652 356 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 KCNE1P15382 129 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 TNFSF9P41273 254 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 GRM5P41594 1212 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 TNFRSF4P43489 277 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 TUFMP49411 452 aaKnown RBP7.87□□□□□ -1.15
COL9A1-209ENST00000489861 GPR15P49685 360 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 CCT2P78371 535 aaKnown RBP7.87□□□□□ -1.15
COL9A1-209ENST00000489861 IL9RQ01113 521 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 MYBPC2Q14324 1141 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 TAF12Q16514 161 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 SLC39A12Q504Y0 691 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 DCAF12L1Q5VU92 463 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 INO80CQ6PI98 192 aaPredicted RBP7.87□□□□□ -1.15
COL9A1-209ENST00000489861 ZBTB8OSQ8IWT0 167 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 TPH2Q8IWU9 490 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 DHX40Q8IX18 779 aaKnown RBP7.87□□□□□ -1.15
COL9A1-209ENST00000489861 ADGRG2Q8IZP9 1017 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 MRPS31Q92665 395 aaKnown RBP7.87□□□□□ -1.15
COL9A1-209ENST00000489861 ACOX2Q99424 681 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 GPR174Q9BXC1 333 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 OXCT2Q9BYC2 517 aaPredicted RBP7.87□□□□□ -1.15
COL9A1-209ENST00000489861 ZSWIM4Q9H7M6 989 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 TRPC7Q9HCX4 862 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 KCNMB3Q9NPA1 279 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 ARHGEF4Q9NR80 690 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 GCNT4Q9P109 453 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 TUBGCP4Q9UGJ1 667 aa7.87□□□□□ -1.15
COL9A1-209ENST00000489861 EIF2B4Q9UI10 523 aaKnown RBP7.87□□□□□ -1.15
COL9A1-209ENST00000489861 MED13LQ71F56 2210 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 MYMKA6NI61 221 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 H0Y8X5 98 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 SCAMP3O14828 347 aaKnown RBP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 USO1O60763 962 aaKnown RBP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 CKMP06732 381 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 NCAM1P13591 858 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 GLDCP23378 1020 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 CD6P30203 668 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 GRIA2P42262 883 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 AARSP49588 968 aaKnown RBP eCLIP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 ACADVLP49748 655 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 RARRES1P49788 294 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 DHCR24Q15392 516 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 KCNT1Q5JUK3 1230 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 ATF7IP2Q5U623 682 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 SDHAF4Q5VUM1 108 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 OVOS1Q6IE37 1185 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 RHBDF2Q6PJF5 856 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 LAYNQ6UX15 382 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 APBB1IPQ7Z5R6 666 aaPredicted RBP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 USP37Q86T82 979 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 LRRTM3Q86VH5 581 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 ARL14EPQ8N8R7 260 aaPredicted RBP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 IPO4Q8TEX9 1081 aaKnown RBP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 KCNE4Q8WWG9 221 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 HAS1Q92839 578 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 TOE1Q96GM8 510 aaKnown RBP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 MRGPRX1Q96LB2 322 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 ZNF578Q96N58 590 aaPredicted RBP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 KIFC3Q9BVG8 833 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 CDT1Q9H211 546 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 TMEM206Q9H813 350 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 WSB2Q9NYS7 404 aaPredicted RBP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 CNTN3Q9P232 1028 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 SEPT3Q9UH03 358 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 MAGED2Q9UNF1 606 aaPredicted RBP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 DNHD1Q96M86 4753 aa7.86□□□□□ -1.15
COL9A1-209ENST00000489861 ZFC3H1O60293 1989 aaKnown RBP7.86□□□□□ -1.15
COL9A1-209ENST00000489861 PLXNA2O75051 1894 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 CELSR1Q9NYQ6 3014 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 C2orf78A6NCI8 922 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 METTL12A8MUP2 240 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 KCNJ18B7U540 433 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 CCNT1O60563 726 aaKnown RBP7.85□□□□□ -1.15
COL9A1-209ENST00000489861 MPOP05164 745 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 C1SP09871 688 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 USP17L7P0C7H9 530 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 HAPLN1P10915 354 aaPredicted RBP7.85□□□□□ -1.15
COL9A1-209ENST00000489861 TCF3P15923 654 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms