RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 H0YHG0 523 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 PRPSAP2O60256 369 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 IFNB1P01574 187 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 CD4P01730 458 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 PDGFRAP16234 1089 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 SMPD1P17405 629 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 APLP1P51693 650 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 RFX6Q8HWS3 928 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 ATP11CQ8NB49 1132 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 CKAP2Q8WWK9 683 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 SNX27Q96L92 541 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 ADAMTS10Q9H324 1103 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 SSU72Q9NP77 194 aaKnown RBP15.65■□□□□ 0.1
COL9A1-208ENST00000489611 KCNK9Q9NPC2 374 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 GJD2Q9UKL4 321 aa15.65■□□□□ 0.1
COL9A1-208ENST00000489611 A6NJR5 290 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 RASA4BC9J798 803 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 ANKRD65E5RJM6 399 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 E7ESA3 106 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 RASA4O43374 803 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 CSDE1O75534 798 aaKnown RBP15.64■□□□□ 0.09
COL9A1-208ENST00000489611 GSTA1P08263 222 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 PNPLA4P41247 253 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 CTCFP49711 727 aaPredicted RBP15.64■□□□□ 0.09
COL9A1-208ENST00000489611 EIF3EP60228 445 aaKnown RBP15.64■□□□□ 0.09
COL9A1-208ENST00000489611 ZBTB6Q15916 424 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 SMTNL2Q2TAL5 461 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 ARHGAP17Q68EM7 881 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 TMEM110Q86TL2 294 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 PDIK1LQ8N165 341 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 EMC1Q8N766 993 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 GBP7Q8N8V2 638 aaPredicted RBP15.64■□□□□ 0.09
COL9A1-208ENST00000489611 MAML1Q92585 1016 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 MAGEB18Q96M61 343 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 SLC4A5Q9BY07 1137 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 DNAJC17Q9NVM6 304 aaKnown RBP15.64■□□□□ 0.09
COL9A1-208ENST00000489611 CNTN3Q9P232 1028 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 MBLAC1A4D2B0 266 aaPredicted RBP15.64■□□□□ 0.09
COL9A1-208ENST00000489611 FAM47DPA6NHR8 397 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 PRPF4O43172 522 aaKnown RBP eCLIP15.64■□□□□ 0.09
COL9A1-208ENST00000489611 SPAG6O75602 509 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 ZSCAN5DPP0CG00 497 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 TGM2P21980 687 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 STX2P32856 288 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 HTRA3P83110 453 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 IL9RQ01113 521 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 NOMO1Q15155 1222 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 KLHL38Q2WGJ6 581 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 CCDC38Q502W7 563 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 PKDCCQ504Y2 493 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 KCNT1Q5JUK3 1230 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 OR6B2Q6IFH4 312 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 CATSPER4Q7RTX7 472 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 LRRC34Q8IZ02 419 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 ZBED8Q8IZ13 594 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 NAT8LQ8N9F0 302 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 GLIS1Q8NBF1 620 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 CCT6BQ92526 530 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 CALN1Q9BXU9 219 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 PRDM16Q9HAZ2 1276 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 TJP2Q9UDY2 1190 aa15.64■□□□□ 0.09
COL9A1-208ENST00000489611 UBQLN1Q9UMX0 589 aaKnown RBP15.64■□□□□ 0.09
COL9A1-208ENST00000489611 CCT8L1PA6NM43 557 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 MDM4O15151 490 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 ADCY6O43306 1168 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 ALDH1A1P00352 501 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 F2P00734 622 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 SDC4P31431 198 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 SLC6A3Q01959 620 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 ROR1Q01973 937 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 PDIA2Q13087 525 aaKnown RBP15.63■□□□□ 0.09
COL9A1-208ENST00000489611 TRABD2AQ86V40 505 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 CNPY4Q8N129 248 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 SPATA18Q8TC71 538 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.63■□□□□ 0.09
COL9A1-208ENST00000489611 PYROXD1Q8WU10 500 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 RXFP2Q8WXD0 754 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 ACSF2Q96CM8 615 aaPredicted RBP15.63■□□□□ 0.09
COL9A1-208ENST00000489611 HAUS1Q96CS2 278 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 ZNF560Q96MR9 790 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 VPS37BQ9H9H4 285 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 PSMC3IPQ9P2W1 217 aaPredicted RBP15.63■□□□□ 0.09
COL9A1-208ENST00000489611 PCSK1NQ9UHG2 260 aa15.63■□□□□ 0.09
COL9A1-208ENST00000489611 E5RJQ4 531 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 GPR32O75388 356 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 SUN1O94901 812 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 NPTXRO95502 500 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 RBP3P10745 1247 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 HOXA11P31270 313 aaPredicted RBP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 RGS2P41220 211 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 PSMC4P43686 418 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 CDH6P55285 790 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 GEMIN4P57678 1058 aaKnown RBP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 DYNLT1P63172 113 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 GOLGA7BQ2TAP0 167 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 ANKRD20A8PQ5CZ79 823 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 ALKAL1Q6UXT8 129 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 FAM183BPQ6ZVS7 135 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 SRRM1Q8IYB3 904 aaKnown RBP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 UBA3Q8TBC4 463 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms