RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TKTL1P51854 596 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 TERF1P54274 439 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 RNASE9P60153 205 aaKnown RBP22.74■■□□□ 1.23
SMC4-221ENST00000489573 CFAP221Q4G0U5 840 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 ALG3Q92685 438 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 ZBED2Q9BTP6 218 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 HERC2P3Q9BVR0 1158 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 CARD9Q9H257 536 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 PNPLA8Q9NP80 782 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 AAASQ9NRG9 546 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 ABI2Q9NYB9 513 aaPredicted RBP22.74■■□□□ 1.23
SMC4-221ENST00000489573 PCDHB5Q9Y5E4 795 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 SLC4A7Q9Y6M7 1214 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 C2CD4BA6NLJ0 364 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 F8VP50 259 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 GRAP2O75791 330 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 FBXO21O94952 628 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 SOD2P04179 222 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 CPB1P15086 417 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 PPM1AP35813 382 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 PAFAH1B1P43034 410 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 PEX5P50542 639 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 RABGGTBP53611 331 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 ADCY1Q08828 1119 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 RAB41Q5JT25 222 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 EFHC1Q5JVL4 640 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 RHOT1Q8IXI2 618 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 FIBCD1Q8N539 461 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 LRRN4CLQ8ND94 238 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 RXFP2Q8WXD0 754 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 PIK3R5Q8WYR1 880 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 KHSRPQ92945 711 aaKnown RBP eCLIP22.73■■□□□ 1.233e-15■■■■■ 43.1
SMC4-221ENST00000489573 MTIF3Q9H2K0 278 aaKnown RBP22.73■■□□□ 1.23
SMC4-221ENST00000489573 INSL6Q9Y581 213 aa22.73■■□□□ 1.23
SMC4-221ENST00000489573 CTAGE15A4D2H0 777 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 PDE2AO00408 941 aaPredicted RBP22.72■■□□□ 1.23
SMC4-221ENST00000489573 DPYSL4O14531 572 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 PSTPIP1O43586 416 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 CEP104O60308 925 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 CTAGE8P0CG41 777 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 PDGFRAP16234 1089 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 FLT3P36888 993 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 SSR1P43307 286 aaKnown RBP22.72■■□□□ 1.23
SMC4-221ENST00000489573 ZNF143P52747 638 aaPredicted RBP22.72■■□□□ 1.23
SMC4-221ENST00000489573 MRPS5P82675 430 aaKnown RBP22.72■■□□□ 1.23
SMC4-221ENST00000489573 SMARCB1Q12824 385 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 ACAP1Q15027 740 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 TAF5Q15542 800 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 DCAF12L1Q5VU92 463 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 DAB2IPQ5VWQ8 1189 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 KIAA1841Q6NSI8 718 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 TRNP1Q6NT89 227 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 CC2D1AQ6P1N0 951 aaPredicted RBP22.72■■□□□ 1.23
SMC4-221ENST00000489573 PRSS55Q6UWB4 352 aaPredicted RBP22.72■■□□□ 1.23
SMC4-221ENST00000489573 ARCQ7LC44 396 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 GPRIN1Q7Z2K8 1008 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 CTAGE6Q86UF2 777 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 HERC6Q8IVU3 1022 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 CTAGE4Q8IX94 777 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 PHOSPHO2Q8TCD6 241 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 RIN2Q8WYP3 895 aaPredicted RBP22.72■■□□□ 1.23
SMC4-221ENST00000489573 DPF3Q92784 378 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 MS4A14Q96JA4 679 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 CNGB3Q9NQW8 809 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 CHST7Q9NS84 486 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 MTRRQ9UBK8 725 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.72■■□□□ 1.235e-47■■■■■ 274.1
SMC4-221ENST00000489573 PTPRDP23468 1912 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 CYP2F1P24903 491 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 ARPP19P56211 112 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 RWDD2BP57060 319 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 TAS2R40P59535 323 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 GPR17Q13304 367 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 PSMD5Q16401 504 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 VSTM1Q6UX27 236 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 RSPO2Q6UXX9 243 aaPredicted RBP22.72■■□□□ 1.23
SMC4-221ENST00000489573 ZNF572Q7Z3I7 529 aaPredicted RBP22.72■■□□□ 1.23
SMC4-221ENST00000489573 CNPY3Q9BT09 278 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 ULBP1Q9BZM6 244 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 ASNSD1Q9NWL6 643 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 EHD2Q9NZN4 543 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 BACE2Q9Y5Z0 518 aa22.72■■□□□ 1.23
SMC4-221ENST00000489573 SART1O43290 800 aaKnown RBP22.71■■□□□ 1.23
SMC4-221ENST00000489573 HSF2BPO75031 334 aa22.71■■□□□ 1.23
SMC4-221ENST00000489573 TADA3O75528 432 aa22.71■■□□□ 1.23
SMC4-221ENST00000489573 GRIK1P39086 918 aa22.71■■□□□ 1.23
SMC4-221ENST00000489573 MAGEA11P43364 429 aa22.71■■□□□ 1.23
SMC4-221ENST00000489573 NDUFV1P49821 464 aa22.71■■□□□ 1.23
SMC4-221ENST00000489573 DDX53Q86TM3 631 aaKnown RBP22.71■■□□□ 1.23
SMC4-221ENST00000489573 RASGEF1CQ8N431 466 aa22.71■■□□□ 1.23
SMC4-221ENST00000489573 ACTRT1Q8TDG2 376 aa22.71■■□□□ 1.23
SMC4-221ENST00000489573 PGLYRP2Q96PD5 576 aa22.71■■□□□ 1.23
SMC4-221ENST00000489573 SMARCAL1Q9NZC9 954 aa22.71■■□□□ 1.23
SMC4-221ENST00000489573 PCDHB12Q9Y5F1 795 aa22.71■■□□□ 1.23
SMC4-221ENST00000489573 ATP2A2P16615 1042 aaKnown RBP22.7■■□□□ 1.22
SMC4-221ENST00000489573 DESP17661 470 aa22.7■■□□□ 1.22
SMC4-221ENST00000489573 SDC4P31431 198 aa22.7■■□□□ 1.22
SMC4-221ENST00000489573 GLUD2P49448 558 aa22.7■■□□□ 1.22
SMC4-221ENST00000489573 DAOAP59103 153 aa22.7■■□□□ 1.22
SMC4-221ENST00000489573 LRRC38Q5VT99 294 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms