RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ARL14EPQ8N8R7 260 aaPredicted RBP9.9□□□□□ -0.82
SSBP1-212ENST00000489378 KIFAP3Q92845 792 aa9.9□□□□□ -0.82
SSBP1-212ENST00000489378 HPS1Q92902 700 aa9.9□□□□□ -0.82
SSBP1-212ENST00000489378 KCNB2Q92953 911 aa9.9□□□□□ -0.82
SSBP1-212ENST00000489378 TMEM206Q9H813 350 aa9.9□□□□□ -0.82
SSBP1-212ENST00000489378 ATP13A2Q9NQ11 1180 aa9.9□□□□□ -0.82
SSBP1-212ENST00000489378 GCNT4Q9P109 453 aa9.9□□□□□ -0.82
SSBP1-212ENST00000489378 UBQLN1Q9UMX0 589 aaKnown RBP9.9□□□□□ -0.82
SSBP1-212ENST00000489378 CYP8B1Q9UNU6 501 aa9.9□□□□□ -0.82
SSBP1-212ENST00000489378 FNDC3AQ9Y2H6 1198 aaKnown RBP9.9□□□□□ -0.82
SSBP1-212ENST00000489378 SNX14Q9Y5W7 946 aa9.9□□□□□ -0.82
SSBP1-212ENST00000489378 SCN1AP35498 2009 aa9.9□□□□□ -0.82
SSBP1-212ENST00000489378 TRAV19A0A0A6YYK7 116 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 TTC26A0AVF1 554 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 C2orf78A6NCI8 922 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 PLK4O00444 970 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 NEMFO60524 1076 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 CYP11A1P05108 521 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 CYP3A5P20815 502 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 ZXDBP98169 803 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 KDSRQ06136 332 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 TOB2Q14106 344 aaPredicted RBP9.9□□□□□ -0.83
SSBP1-212ENST00000489378 NOLC1Q14978 699 aaKnown RBP eCLIP9.9□□□□□ -0.83
SSBP1-212ENST00000489378 CCDC157Q569K6 752 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 SPPL2BQ8TCT7 592 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 C2orf15Q8WU43 125 aaKnown RBP9.9□□□□□ -0.83
SSBP1-212ENST00000489378 TNFRSF25Q93038 417 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 ERLEC1Q96DZ1 483 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 ZNF419Q96HQ0 510 aaPredicted RBP9.9□□□□□ -0.83
SSBP1-212ENST00000489378 PNKPQ96T60 521 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 TMEM60Q9H2L4 133 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 FAM124BQ9H5Z6 455 aaPredicted RBP9.9□□□□□ -0.83
SSBP1-212ENST00000489378 CD93Q9NPY3 652 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 TMLHEQ9NVH6 421 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 ARHGAP28Q9P2N2 729 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 DNMT3LQ9UJW3 386 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 PCDHGC3Q9UN70 934 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 BTBD3Q9Y2F9 522 aa9.9□□□□□ -0.83
SSBP1-212ENST00000489378 STK36Q9NRP7 1315 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 TEX15Q9BXT5 2789 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 TEX51A0A1B0GUA7 166 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 MYMKA6NI61 221 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 LACTBL1A8MY62 500 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 SCAMP3O14828 347 aaKnown RBP9.89□□□□□ -0.83
SSBP1-212ENST00000489378 NOL4O94818 638 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 APODP05090 189 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 CSH1P0DML2 217 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 CSH2P0DML3 217 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 HLA-EP13747 358 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 TNFSF9P41273 254 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 WNT7BP56706 349 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 BNC1Q01954 994 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 STK3Q13188 491 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 SMAD1Q15797 465 aaKnown RBP9.89□□□□□ -0.83
SSBP1-212ENST00000489378 ECM1Q16610 540 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 DDR2Q16832 855 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 LRRC69Q6ZNQ3 347 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 GPR155Q7Z3F1 870 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 DAW1Q8N136 415 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 FAM181AQ8N9Y4 354 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 SPATA18Q8TC71 538 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 RHBDD1Q8TEB9 315 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 CDC6Q99741 560 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 PI4K2AQ9BTU6 479 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 ZDHHC5Q9C0B5 715 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 HAPLN2Q9GZV7 340 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 BHMT2Q9H2M3 363 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 GAREM1Q9H706 876 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 PLEKHA5Q9HAU0 1116 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 ARHGEF4Q9NR80 690 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 TM7SF3Q9NS93 570 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 SUSD2Q9UGT4 822 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 ARHGAP26Q9UNA1 814 aa9.89□□□□□ -0.83
SSBP1-212ENST00000489378 DOPEY2Q9Y3R5 2298 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 COL5A1P20908 1838 aaPredicted RBP9.88□□□□□ -0.83
SSBP1-212ENST00000489378 A0A0A0MRY4 1105 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 CAPN8A6NHC0 703 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 CILPO75339 1184 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 PRPF40AO75400 957 aaKnown RBP9.88□□□□□ -0.83
SSBP1-212ENST00000489378 TOM1L1O75674 476 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 GNSP15586 552 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 TCF3P15923 654 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 RPA1P27694 616 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 WASP42768 502 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 SEMG2Q02383 582 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 MYO1EQ12965 1108 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 DHCR24Q15392 516 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 SAFBQ15424 915 aaKnown RBP eCLIP9.88□□□□□ -0.83
SSBP1-212ENST00000489378 LCE2CQ5TA81 110 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 C9orf57Q5W0N0 161 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 WSCD1Q658N2 575 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 DHRS13Q6UX07 377 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 DBX2Q6ZNG2 339 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 FILIP1Q7Z7B0 1213 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 ADGRG2Q8IZP9 1017 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 PHTF2Q8N3S3 785 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 TRMT2BQ96GJ1 504 aaKnown RBP9.88□□□□□ -0.83
SSBP1-212ENST00000489378 KIF2CQ99661 725 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 SEMA4CQ9C0C4 833 aa9.88□□□□□ -0.83
SSBP1-212ENST00000489378 SLC6A17Q9H1V8 727 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms