RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SIRT5Q9NXA8 310 aa8.91□□□□□ -0.98
TRAPPC12-221ENST00000489032 MYOTQ9UBF9 498 aa8.91□□□□□ -0.98
TRAPPC12-221ENST00000489032 GABBR1Q9UBS5 961 aa8.91□□□□□ -0.98
TRAPPC12-221ENST00000489032 CBLCQ9ULV8 474 aa8.91□□□□□ -0.98
TRAPPC12-221ENST00000489032 FAM50BQ9Y247 325 aa8.91□□□□□ -0.98
TRAPPC12-221ENST00000489032 DOCK5Q9H7D0 1870 aa8.91□□□□□ -0.98
TRAPPC12-221ENST00000489032 NRCAMQ92823 1304 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 RRN3P2A6NIE6 340 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 HBP1O60381 514 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 SMIM10L2AP0DMW4 78 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 SMIM10L2BP0DMW5 78 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 ZSCAN22P10073 491 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 RESTQ13127 1097 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 PPFIA1Q13136 1202 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 EPHA7Q15375 998 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 PTGISQ16647 500 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 EMC4Q5J8M3 183 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 TMC6Q7Z403 805 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 THNSL2Q86YJ6 484 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 CCDC60Q8IWA6 550 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 NEK9Q8TD19 979 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 AFAP1L1Q8TED9 768 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 ATP8B4Q8TF62 1192 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 ALG3Q92685 438 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 GJA10Q969M2 543 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 ZNF396Q96N95 335 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 MTMR9Q96QG7 549 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 TMEM60Q9H2L4 133 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 ZNF552Q9H707 407 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 KLHL14Q9P2G3 628 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 HDAC6Q9UBN7 1215 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 PCDHB6Q9Y5E3 794 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 ATP6V1DQ9Y5K8 247 aa8.9□□□□□ -0.98
TRAPPC12-221ENST00000489032 GRIN2DO15399 1336 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 IGKV6D-21A0A0A0MT36 114 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 ZNF503-AS2A6NEH8 195 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 LRRC10BA6NIK2 292 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 B4GALT4O60513 344 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 PTMSP20962 102 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 PRPHP41219 470 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 TECP42680 631 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 QARSP47897 775 aaKnown RBP8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 TOB1P50616 345 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 PSMC5P62195 406 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 SRSF3P84103 164 aaKnown RBP8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 PLCB4Q15147 1175 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 MLANAQ16655 118 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 PLEKHN1Q494U1 663 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 ARL6IP4Q66PJ3 421 aaKnown RBP8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 HAUS3Q68CZ6 603 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 B3GNT9Q6UX72 402 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 OVCH1Q7RTY7 1134 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 RSPH3Q86UC2 560 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 HERC6Q8IVU3 1022 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 UBR7Q8N806 425 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 CHST14Q8NCH0 376 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 OR2W6PQ8NHA6 318 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 UHMK1Q8TAS1 419 aaKnown RBP8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 GDPD5Q8WTR4 605 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 CCDC43Q96MW1 224 aaKnown RBP8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 IRF2BPLQ9H1B7 796 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 TRPV6Q9H1D0 765 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 RNPEPQ9H4A4 650 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 TRMT13Q9NUP7 481 aaKnown RBP8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 TELO2Q9Y4R8 837 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 SCN10AQ9Y5Y9 1956 aa8.89□□□□□ -0.99
TRAPPC12-221ENST00000489032 COL1A2P08123 1366 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 IGSF9BQ9UPX0 1349 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 TRIOO75962 3097 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 SLC12A8A0AV02 714 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 HRKO00198 91 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 HIP1RO75146 1068 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 TADA3O75528 432 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 RPLP2P05387 115 aaKnown RBP8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 DDIT3P35638 169 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 JAM2P57087 298 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 IGBP1P78318 339 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 NUCB2P80303 420 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 ATP2C1P98194 919 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 BFSP2Q13515 415 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 PDIA5Q14554 519 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 PCBP1Q15365 356 aaKnown RBP eCLIP8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 XKR3Q5GH77 459 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 ZNF484Q5JVG2 852 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 ATL3Q6DD88 541 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 TAF2Q6P1X5 1199 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 OTUD6AQ7L8S5 288 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 TRMT1LQ7Z2T5 733 aaKnown RBP8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 DEFB128Q7Z7B8 93 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 PTRH1Q86Y79 214 aaKnown RBP8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 KIF18BQ86Y91 864 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 TSPAN17Q96FV3 270 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 GBP4Q96PP9 640 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 PCYT2Q99447 389 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 EIF2AK1Q9BQI3 630 aaKnown RBP8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 SETD4Q9NVD3 440 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 LRWD1Q9UFC0 647 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 CFAP45Q9UL16 551 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 SPTBN4Q9H254 2564 aa8.88□□□□□ -0.99
TRAPPC12-221ENST00000489032 CBX4O00257 560 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms