RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 LRRC19Q9H756 370 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 ZWILCHQ9H900 591 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.22■□□□□ 0.992e-7■■■□□ 16.5
NECAB3-213ENST00000488489 KRT10P13645 584 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 LCP1P13796 627 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 GPD1P21695 349 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 MIPP30301 263 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 COILP38432 576 aaPredicted RBP21.22■□□□□ 0.99
NECAB3-213ENST00000488489 ZFYVE27Q5T4F4 411 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 POLNQ7Z5Q5 900 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 PIGZQ86VD9 579 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 CFAP57Q96MR6 1250 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 CNPY3Q9BT09 278 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 CHST7Q9NS84 486 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 PCSK1NQ9UHG2 260 aa21.22■□□□□ 0.99
NECAB3-213ENST00000488489 M0QZQ0 153 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 PITPNM1O00562 1244 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 ENPP3O14638 875 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 XPO1O14980 1071 aaKnown RBP21.21■□□□□ 0.99
NECAB3-213ENST00000488489 DAPK3O43293 454 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 FAM153BP0C7A2 387 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 DHX34Q14147 1143 aaKnown RBP21.21■□□□□ 0.99
NECAB3-213ENST00000488489 FAM153CQ494X1 144 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 CCDC14Q49A88 953 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 NOMO2Q5JPE7 1267 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 CLEC20AQ6ZU45 233 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 JAMLQ86YT9 394 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 RSPH1Q8WYR4 309 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 PCED1BQ96HM7 432 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 HSFY1Q96LI6 401 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 UROC1Q96N76 676 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 FAM153AQ9UHL3 310 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 TSC2P49815 1807 aa21.21■□□□□ 0.99
NECAB3-213ENST00000488489 GOLGA6BA6NDN3 693 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 C3orf70A6NLC5 250 aaPredicted RBP21.2■□□□□ 0.98
NECAB3-213ENST00000488489 ODC1P11926 461 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 NPR3P17342 541 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 EPHB4P54760 987 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 PLCB3Q01970 1234 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 DSC1Q08554 894 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 ACAP1Q15027 740 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 DCLRE1AQ6PJP8 1040 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 ZDHHC17Q8IUH5 632 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 RBM41Q96IZ5 413 aaKnown RBP21.2■□□□□ 0.98
NECAB3-213ENST00000488489 TMEM30AQ9NV96 361 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 ASNSD1Q9NWL6 643 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 SCN5AQ14524 2016 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 TRIM66O15016 1216 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 RNF8O76064 485 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 CYP11A1P05108 521 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 RABGGTBP53611 331 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 SNX16P57768 344 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 SNX1Q13596 522 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 SPOCD1Q6ZMY3 1216 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 C10orf67Q8IYJ2 551 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 SCLYQ96I15 445 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 PEBP4Q96S96 227 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 FAM118BQ9BPY3 351 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 TRIM31Q9BZY9 425 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 NEUROG2Q9H2A3 272 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 CYLDQ9NQC7 956 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 TBC1D13Q9NVG8 400 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 DDX56Q9NY93 547 aaKnown RBP21.2■□□□□ 0.98
NECAB3-213ENST00000488489 CDH9Q9ULB4 789 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 USP18Q9UMW8 372 aa21.2■□□□□ 0.98
NECAB3-213ENST00000488489 UTP11Q9Y3A2 253 aaKnown RBP21.2■□□□□ 0.98
NECAB3-213ENST00000488489 LRRD1A4D1F6 860 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 SHOX2O60902 331 aaPredicted RBP21.19■□□□□ 0.98
NECAB3-213ENST00000488489 CDKN2BP42772 138 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 ATP11AP98196 1134 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 CDO1Q16878 200 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 KAZNQ674X7 775 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 CYP4V2Q6ZWL3 525 aaPredicted RBP21.19■□□□□ 0.98
NECAB3-213ENST00000488489 SND1Q7KZF4 910 aaKnown RBP eCLIP21.19■□□□□ 0.98
NECAB3-213ENST00000488489 NDRG1Q92597 394 aaKnown RBP21.19■□□□□ 0.98
NECAB3-213ENST00000488489 ERP44Q9BS26 406 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 MED10Q9BTT4 135 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 DPH5Q9H2P9 285 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 KRT82Q9NSB4 513 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 TMEM161AQ9NX61 479 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 TRUB2O95900 331 aaKnown RBP21.19■□□□□ 0.98
NECAB3-213ENST00000488489 KRT7P08729 469 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 PCK1P35558 622 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 FNTAP49354 379 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 CACNA2D1P54289 1103 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 MAP3K7CLP57077 242 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 HADHQ16836 314 aaKnown RBP21.19■□□□□ 0.98
NECAB3-213ENST00000488489 DUPD1Q68J44 220 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 EMBQ6PCB8 327 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 SLC39A5Q6ZMH5 540 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 SLC26A9Q7LBE3 791 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 CCDC105Q8IYK2 499 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 COLGALT2Q8IYK4 626 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 FAM76AQ8TAV0 307 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 MYCBPAPQ8TBZ2 947 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 ADAM33Q9BZ11 813 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 DCLK3Q9C098 648 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 DNAJB4Q9UDY4 337 aa21.19■□□□□ 0.98
NECAB3-213ENST00000488489 FAM187AA6NFU0 413 aa21.18■□□□□ 0.98
NECAB3-213ENST00000488489 DPYSL4O14531 572 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms