RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TCP11X1B4DZS4 312 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 PTGESO14684 152 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 ZC3H11AO75152 810 aaKnown RBP eCLIP14.4□□□□□ -0.1
COPS7B-221ENST00000488111 RTN3O95197 1032 aaPredicted RBP14.4□□□□□ -0.1
COPS7B-221ENST00000488111 H2AFZP0C0S5 128 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 PLTPP55058 493 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 ZBTB6Q15916 424 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 TCTN1Q2MV58 587 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 ZNF699Q32M78 642 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 C1orf53Q5VUE5 145 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 SCARA5Q6ZMJ2 495 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 H2AFVQ71UI9 128 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 SPATA21Q7Z572 469 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 FBXO25Q8TCJ0 367 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 GRHL1Q9NZI5 618 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 CACNG4Q9UBN1 327 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 POLIQ9UNA4 740 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 TRIM33Q9UPN9 1127 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 ASB3Q9Y575 518 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 ANK1P16157 1881 aa14.4□□□□□ -0.1
COPS7B-221ENST00000488111 FAM170AA1A519 330 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 CALCAP01258 141 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 GBP1P32455 592 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 SOX4Q06945 474 aaPredicted RBP14.39□□□□□ -0.11
COPS7B-221ENST00000488111 SNX1Q13596 522 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 WDR72Q3MJ13 1102 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 XKR4Q5GH76 650 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 UBAP2Q5T6F2 1119 aaKnown RBP14.39□□□□□ -0.11
COPS7B-221ENST00000488111 DCAF12L1Q5VU92 463 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 JAMLQ86YT9 394 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 HACE1Q8IYU2 909 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 GALNT15Q8N3T1 639 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 GSTCDQ8NEC7 633 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 UTP4Q969X6 686 aaKnown RBP14.39□□□□□ -0.11
COPS7B-221ENST00000488111 RAB3IPQ96QF0 476 aaPredicted RBP14.39□□□□□ -0.11
COPS7B-221ENST00000488111 TRIM7Q9C029 511 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 SEMA4AQ9H3S1 761 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 PRDM5Q9NQX1 630 aaPredicted RBP14.39□□□□□ -0.11
COPS7B-221ENST00000488111 RGS18Q9NS28 235 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.39□□□□□ -0.11
COPS7B-221ENST00000488111 LRRD1A4D1F6 860 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 ARL5CA6NH57 179 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 CYP26A1O43174 497 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 ZNF623O75123 536 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 ATP6V1C1P21283 382 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 RFX1P22670 979 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 SSR1P43307 286 aaKnown RBP14.39□□□□□ -0.11
COPS7B-221ENST00000488111 GCNT1Q02742 428 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 CCDC15Q0P6D6 951 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 CUL2Q13617 745 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 PARP6Q2NL67 630 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 PLEKHG4Q58EX7 1191 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 RNF43Q68DV7 783 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 MRPL10Q7Z7H8 261 aaKnown RBP14.39□□□□□ -0.11
COPS7B-221ENST00000488111 EXOC3L1Q86VI1 746 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 ECHDC2Q86YB7 292 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 NT5DC4Q86YG4 428 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 BEST2Q8NFU1 509 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 ITFG2Q969R8 447 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 NAP1L3Q99457 506 aaPredicted RBP14.39□□□□□ -0.11
COPS7B-221ENST00000488111 RNPEPL1Q9HAU8 725 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 NKX1-2Q9UD57 310 aaPredicted RBP14.39□□□□□ -0.11
COPS7B-221ENST00000488111 DERAQ9Y315 318 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 SNX24Q9Y343 169 aa14.39□□□□□ -0.11
COPS7B-221ENST00000488111 RASGRF2O14827 1237 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 RIPK2O43353 540 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 CLTBP09497 229 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 WEE2P0C1S8 567 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 KRT5P13647 590 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 KCNE1P15382 129 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 SCNN1GP51170 649 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 RBP5P82980 135 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 LMNTD2Q8IXW0 634 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 SHC3Q92529 594 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 HPDLQ96IR7 371 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 RPS6KC1Q96S38 1066 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 TRAIPQ9BWF2 469 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 CARD9Q9H257 536 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 CTNNAL1Q9UBT7 734 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 RASAL2Q9UJF2 1139 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 ITGA11Q9UKX5 1188 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 TBX21Q9UL17 535 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 UBQLN1Q9UMX0 589 aaKnown RBP14.38□□□□□ -0.11
COPS7B-221ENST00000488111 INPP5FQ9Y2H2 1132 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 CITO14578 2027 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 C9IYK1 514 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 SMIM24O75264 130 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 UNC5CO95185 931 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 POMCP01189 267 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 CD58P19256 250 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 CALB2P22676 271 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 ITGB8P26012 769 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 PTGIRP43119 386 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 RAP1GAPP47736 663 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 SLC24A5Q71RS6 500 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 FBF1Q8TES7 1133 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 DYDC1Q8WWB3 177 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 CKAP2Q8WWK9 683 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 RMDN2Q96LZ7 410 aa14.38□□□□□ -0.11
COPS7B-221ENST00000488111 ROPN1BQ9BZX4 212 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms