RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 SIX2Q9NPC8 291 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 MIOSQ9NXC5 875 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 CEP72Q9P209 647 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 CACNG4Q9UBN1 327 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 RNF112Q9ULX5 631 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 PRG3Q9Y2Y8 225 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-218ENST00000487565 NUB1Q9Y5A7 615 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 FHOD1Q9Y613 1164 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 PDCD11Q14690 1871 aaKnown RBP8.18□□□□□ -1.1
GARNL3-218ENST00000487565 ARHGEF37A1IGU5 675 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 TMEM189-UBE2V1I3L0A0 370 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 PIRO00625 290 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 EPHB6O15197 1021 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 EIF4EBP3O60516 100 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-218ENST00000487565 MFAP3LO75121 409 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 B3GAT3O94766 335 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 DDHD2O94830 711 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 IGLV1-40P01703 118 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 GYPCP04921 128 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 PTMAP06454 111 aaKnown RBP8.18□□□□□ -1.1
GARNL3-218ENST00000487565 ODC1P11926 461 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 UCHL3P15374 230 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 PAX3P23760 479 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 ASPAP45381 313 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 SLC11A1P49279 550 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 CLCNKBP51801 687 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 MFAP3P55082 362 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 YWHAEP62258 255 aaKnown RBP8.18□□□□□ -1.1
GARNL3-218ENST00000487565 APBA1Q02410 837 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 GCNT1Q02742 428 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 CCDC173Q0VFZ6 552 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 CUL2Q13617 745 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 FIGNQ5HY92 759 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 RASIP1Q5U651 963 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 KLHDC7AQ5VTJ3 777 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 IQCEQ6IPM2 695 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 GJB7Q6PEY0 223 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 ENOSF1Q7L5Y1 443 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 ZNF280BQ86YH2 543 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 CNGA4Q8IV77 575 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 COLGALT2Q8IYK4 626 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 FIBCD1Q8N539 461 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 SPC24Q8NBT2 197 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 ZNF397Q8NF99 534 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-218ENST00000487565 LMO3Q8TAP4 145 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 CXorf38Q8TB03 319 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 HASPINQ8TF76 798 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 CCDC74AQ96AQ1 378 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 ZNF689Q96CS4 500 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-218ENST00000487565 ZNF558Q96NG5 402 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 SPAG5Q96R06 1193 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 PAAF1Q9BRP4 392 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 KCNF1Q9H3M0 494 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 SMYD3Q9H7B4 428 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 C7orf69Q9H7B7 122 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 NRDE2Q9H7Z3 1164 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 APOBEC3GQ9HC16 384 aaKnown RBP8.18□□□□□ -1.1
GARNL3-218ENST00000487565 NLRC4Q9NPP4 1024 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 DNAJB4Q9UDY4 337 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 SNX9Q9Y5X1 595 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 MRPL42Q9Y6G3 142 aaKnown RBP8.18□□□□□ -1.1
GARNL3-218ENST00000487565 MKI67P46013 3256 aaKnown RBP8.18□□□□□ -1.1
GARNL3-218ENST00000487565 SF3B1O75533 1304 aaKnown RBP eCLIP8.18□□□□□ -1.1
GARNL3-218ENST00000487565 TTC3P53804 2025 aa8.18□□□□□ -1.1
GARNL3-218ENST00000487565 A0A1W2PQJ5 194 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 KPNA7A9QM74 516 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 F8VZ95 297 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 HUS1O60921 280 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 LRRN2O75325 713 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 CST3P01034 146 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-218ENST00000487565 CD58P19256 250 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 PPM1AP35813 382 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 RAP1GAPP47736 663 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 BCAR1P56945 870 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 GSDMDP57764 484 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 HTRA4P83105 476 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-218ENST00000487565 SHHQ15465 462 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 UPP1Q16831 310 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 ARHGAP44Q17R89 818 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 ZNF423Q2M1K9 1284 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 WDR72Q3MJ13 1102 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 DCLRE1AQ6PJP8 1040 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 DSTYKQ6XUX3 929 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 RRAGAQ7L523 313 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 FMNL3Q8IVF7 1028 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 FAM20CQ8IXL6 584 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 ADGRF2Q8IZF7 708 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 C12orf50Q8NA57 414 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-218ENST00000487565 COLGALT1Q8NBJ5 622 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 C3orf58Q8NDZ4 430 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 RABGGTAQ92696 567 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 KAT5Q92993 513 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 ELMO3Q96BJ8 720 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 FAXDC2Q96IV6 333 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 MMS19Q96T76 1030 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 RAD9AQ99638 391 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 GDF15Q99988 308 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 COLEC11Q9BWP8 271 aa8.17□□□□□ -1.1
GARNL3-218ENST00000487565 TMPRSS13Q9BYE2 586 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms