RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 DDX42Q86XP3 938 aaKnown RBP eCLIP10.88□□□□□ -0.67
RNF220-215ENST00000487332 ZMIZ2Q8NF64 920 aa10.88□□□□□ -0.67
RNF220-215ENST00000487332 SMOQ99835 787 aa10.88□□□□□ -0.67
RNF220-215ENST00000487332 FAM83CQ9BQN1 747 aa10.88□□□□□ -0.67
RNF220-215ENST00000487332 MED10Q9BTT4 135 aa10.88□□□□□ -0.67
RNF220-215ENST00000487332 FOXQ1Q9C009 403 aa10.88□□□□□ -0.67
RNF220-215ENST00000487332 FBXO44Q9H4M3 255 aa10.88□□□□□ -0.67
RNF220-215ENST00000487332 CISHQ9NSE2 258 aa10.88□□□□□ -0.67
RNF220-215ENST00000487332 GREB1Q4ZG55 1949 aa10.88□□□□□ -0.67
RNF220-215ENST00000487332 TRIOO75962 3097 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 C2orf78A6NCI8 922 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 HHLA1C9JL84 531 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 BIN1O00499 593 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
RNF220-215ENST00000487332 CTHP32929 405 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 NBL1P41271 181 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 CDR1P51861 262 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 GCNT1Q02742 428 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 TAF10Q12962 218 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 LRRC32Q14392 662 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 UBXN2BQ14CS0 331 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 ZNF276Q8N554 614 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 SLC4A11Q8NBS3 891 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 OSCP1Q8WVF1 389 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 FAM3CQ92520 227 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 FBXO32Q969P5 355 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 JAKMIP2Q96AA8 810 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 ELMO3Q96BJ8 720 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 CYFIP2Q96F07 1278 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 TMEM176AQ96HP8 235 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 UBXN6Q9BZV1 441 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 NUP62CLQ9H1M0 184 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 CHRDQ9H2X0 955 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 LMBRD1Q9NUN5 540 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 DACH1Q9UI36 760 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 CCL26Q9Y258 94 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 HELZP42694 1942 aaKnown RBP10.87□□□□□ -0.67
RNF220-215ENST00000487332 DOCK6Q96HP0 2047 aa10.87□□□□□ -0.67
RNF220-215ENST00000487332 TICRRQ7Z2Z1 1910 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 FAM170BA6NMN3 283 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 SPECC1L-ADORA2AF8WAN1 911 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 STK25O00506 426 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 LRRN2O75325 713 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 AFPP02771 609 aaKnown RBP10.86□□□□□ -0.67
RNF220-215ENST00000487332 DCNP07585 359 aaKnown RBP10.86□□□□□ -0.67
RNF220-215ENST00000487332 HDCP19113 662 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 CD58P19256 250 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 ERCC5P28715 1186 aaPredicted RBP10.86□□□□□ -0.67
RNF220-215ENST00000487332 PSEN1P49768 467 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 KPNA1P52294 538 aaPredicted RBP10.86□□□□□ -0.67
RNF220-215ENST00000487332 RAD23BP54727 409 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 AMPD2Q01433 879 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 FZD5Q13467 585 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 RUNX3Q13761 415 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 ANGPT1Q15389 498 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 CAMK4Q16566 473 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 ITPRIPL2Q3MIP1 535 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 ZNF528Q3MIS6 628 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 CC2D1AQ6P1N0 951 aaPredicted RBP10.86□□□□□ -0.67
RNF220-215ENST00000487332 KLHDC10Q6PID8 442 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 RBM43Q6ZSC3 357 aaKnown RBP10.86□□□□□ -0.67
RNF220-215ENST00000487332 C1orf210Q8IVY1 113 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 SYNPOQ8N3V7 929 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 CPA6Q8N4T0 437 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 ARL14EPQ8N8R7 260 aaPredicted RBP10.86□□□□□ -0.67
RNF220-215ENST00000487332 C12orf29Q8N999 325 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 LMO3Q8TAP4 145 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 RIN3Q8TB24 985 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 SH3RF2Q8TEC5 729 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 ATP2A3Q93084 1043 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 EXOC4Q96A65 974 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 FAM81BQ96LP2 452 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 NT5C1BQ96P26 610 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 SLC22A12Q96S37 553 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 KCNK16Q96T55 309 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 ARID3AQ99856 593 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 DUSP16Q9BY84 665 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 TRPC7Q9HCX4 862 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 HPS4Q9NQG7 708 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 PRMT8Q9NR22 394 aaPredicted RBP10.86□□□□□ -0.67
RNF220-215ENST00000487332 FAM49BQ9NUQ9 324 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 FBXO4Q9UKT5 387 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 KIAA1257Q9ULG3 409 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 SCML2Q9UQR0 700 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.86□□□□□ -0.67
RNF220-215ENST00000487332 USP3Q9Y6I4 520 aa10.86□□□□□ -0.67
RNF220-215ENST00000487332 GTPBP10A4D1E9 387 aaKnown RBP10.85□□□□□ -0.67
RNF220-215ENST00000487332 GOLGA6L22H0YM25 854 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 BEST1O76090 585 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 PAPSS2O95340 614 aaPredicted RBP10.85□□□□□ -0.67
RNF220-215ENST00000487332 PAEPP09466 180 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 CHRNB1P11230 501 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 STX17P56962 302 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 MAP3K7CLP57077 242 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 KCNH2Q12809 1159 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 ORC1Q13415 861 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 STILQ15468 1287 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 MEA1Q16626 185 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 EML3Q32P44 896 aa10.85□□□□□ -0.67
RNF220-215ENST00000487332 RAB41Q5JT25 222 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms