RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	TMLHE	Q9NVH6	421 aa		13.89	□□□□□ -0.19
NR1H3-223	ENST00000486991	NCDN	Q9UBB6	729 aa		13.89	□□□□□ -0.19
NR1H3-223	ENST00000486991	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.89	□□□□□ -0.19
NR1H3-223	ENST00000486991	HCRT	O43612	131 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	SOAT2	O75908	522 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	MYL4	P12829	197 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	ATF6	P18850	670 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	CD58	P19256	250 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	ALDH1A3	P47895	512 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	CDR1	P51861	262 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	CDH8	P55286	799 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	GCNT1	Q02742	428 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	LPAL2	Q16609	132 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	SLC39A12	Q504Y0	691 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	VIT	Q6UXI7	678 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	ZNF852	Q6ZMS4	543 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	PDZD4	Q76G19	769 aa	Predicted RBP	13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	ENOSF1	Q7L5Y1	443 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	SPC24	Q8NBT2	197 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	KBTBD7	Q8WVZ9	684 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	ATRIP	Q8WXE1	791 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	FAM81B	Q96LP2	452 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	KREMEN1	Q96MU8	473 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	SPAG5	Q96R06	1193 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	GPR88	Q9GZN0	384 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	SDCBP2	Q9H190	292 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	BRD9	Q9H8M2	597 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	DLL3	Q9NYJ7	618 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	HSFX1	Q9UBD0	423 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	SLC27A5	Q9Y2P5	690 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	NME7	Q9Y5B8	376 aa		13.88	□□□□□ -0.19
NR1H3-223	ENST00000486991	NCOR2	Q9Y618	2525 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	GABRD	O14764	452 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	GYPC	P04921	128 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	TPM1	P09493	284 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	GDI1	P31150	447 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	HOXC13	P31276	330 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	USP8	P40818	1118 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	EPHB3	P54753	998 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	YWHAE	P62258	255 aa	Known RBP	13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	TRIM14	Q14142	442 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	DRAP1	Q14919	205 aa	Predicted RBP	13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	SOWAHA	Q2M3V2	549 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	FIGN	Q5HY92	759 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	DPH6	Q7L8W6	267 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	ADGRF2	Q8IZF7	708 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	TOP6BL	Q8N6T0	577 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	ZBTB44	Q8NCP5	570 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	NELL1	Q92832	810 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	RSPRY1	Q96DX4	576 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	IQCD	Q96DY2	449 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	FAXDC2	Q96IV6	333 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	ASB16	Q96NS5	453 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	MRPL45	Q9BRJ2	306 aa	Known RBP	13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	NAA15	Q9BXJ9	866 aa	Known RBP	13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	STK33	Q9BYT3	514 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	SNX25	Q9H3E2	840 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	CYP3A43	Q9HB55	503 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	ZFP14	Q9HCL3	533 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	CISH	Q9NSE2	258 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	ZSCAN32	Q9NX65	697 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	SMG5	Q9UPR3	1016 aa	Known RBP	13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	DAAM1	Q9Y4D1	1078 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	ASB3	Q9Y575	518 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	PCDHB4	Q9Y5E5	795 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	PCDHGA2	Q9Y5H1	932 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	HELZ	P42694	1942 aa	Known RBP	13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	MYH10	P35580	1976 aa		13.87	□□□□□ -0.19
NR1H3-223	ENST00000486991	LILRB5	O75023	590 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	FGF19	O95750	216 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	PNMA6A	P0CW24	399 aa	Predicted RBP	13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	KRT5	P13647	590 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	CASP14	P31944	242 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	TUFM	P49411	452 aa	Known RBP	13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	TEAD2	Q15562	447 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	GAREM2	Q75VX8	874 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	DCP1B	Q8IZD4	617 aa	Known RBP	13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	TMEM86A	Q8N2M4	240 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	ZNF397	Q8NF99	534 aa	Predicted RBP	13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	OR6B3	Q8NGW1	331 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	SHKBP1	Q8TBC3	707 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	SPATA18	Q8TC71	538 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	C2orf15	Q8WU43	125 aa	Known RBP	13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	TRMT61B	Q9BVS5	477 aa	Known RBP	13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	EDEM3	Q9BZQ6	932 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	TTYH3	Q9C0H2	523 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	LMAN1L	Q9HAT1	526 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	PARD6A	Q9NPB6	346 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	PRMT8	Q9NR22	394 aa	Predicted RBP	13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	ASAH2	Q9NR71	780 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	CAPN11	Q9UMQ6	739 aa		13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991	LUC7L2	Q9Y383	392 aa	Known RBP	13.86	□□□□□ -0.19
NR1H3-223	ENST00000486991		A0A1W2PQJ5	194 aa		13.85	□□□□□ -0.19
NR1H3-223	ENST00000486991		A8MXQ7	604 aa		13.85	□□□□□ -0.19
NR1H3-223	ENST00000486991	GOLGA6L6	A8MZA4	724 aa		13.85	□□□□□ -0.19
NR1H3-223	ENST00000486991	RNF225	M0QZC1	329 aa	Predicted RBP	13.85	□□□□□ -0.19
NR1H3-223	ENST00000486991	FOXN3	O00409	490 aa	Predicted RBP	13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms