RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ENPP3O14638 875 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 SYN3O14994 580 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 MDM4O15151 490 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 TRAPPC3O43617 180 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 NBNO60934 754 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 GAS8O95995 478 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 POMCP01189 267 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 KDELR1P24390 212 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 IL1R2P27930 398 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 ADORA2BP29275 332 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 TKTP29401 623 aaKnown RBP12.19□□□□□ -0.46
PRKCB-207ENST00000486868 FLT3P36888 993 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 RGS7P49802 495 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 ARSEP51690 589 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 CAV1Q03135 178 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 MTMR3Q13615 1198 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 PTK6Q13882 451 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 GPNMBQ14956 572 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 CCDC14Q49A88 953 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 INTS6LQ5JSJ4 861 aaKnown RBP12.19□□□□□ -0.46
PRKCB-207ENST00000486868 RAB41Q5JT25 222 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 CLLU1OSQ5K130 101 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 KIAA0319Q5VV43 1072 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 TTC27Q6P3X3 843 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 CLEC20AQ6ZU45 233 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 BBS12Q6ZW61 710 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 SND1Q7KZF4 910 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRKCB-207ENST00000486868 BEND5Q7L4P6 421 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 COLGALT2Q8IYK4 626 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 EMC1Q8N766 993 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 RNF169Q8NCN4 708 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 BBOF1Q8ND07 529 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 IRGQQ8WZA9 623 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 RAPGEF5Q92565 580 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 NKD2Q969F2 451 aaPredicted RBP12.19□□□□□ -0.46
PRKCB-207ENST00000486868 NT5C3BQ969T7 300 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 SMARCD1Q96GM5 515 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 DEFB118Q96PH6 123 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 PKMYT1Q99640 499 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 B3GNT5Q9BYG0 378 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 CNGB3Q9NQW8 809 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 WHRNQ9P202 907 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 HPCAL4Q9UM19 191 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 NFU1Q9UMS0 254 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 LRRD1A4D1F6 860 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 DAPK3O43293 454 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 PRPSAP2O60256 369 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 DAB1O75553 588 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 OAZ2O95190 189 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 ITIH2P19823 946 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 NOS2P35228 1153 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 MATKP42679 507 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 TNNT3P45378 269 aaPredicted RBP12.18□□□□□ -0.46
PRKCB-207ENST00000486868 AIF1P55008 147 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 FAM193AP78312 1265 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 MRPS5P82675 430 aaKnown RBP12.18□□□□□ -0.46
PRKCB-207ENST00000486868 TSPY1Q01534 308 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 ADCY1Q08828 1119 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 TFDP2Q14188 446 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 MDH1BQ5I0G3 518 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 TRNP1Q6NT89 227 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 BNIPLQ7Z465 357 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 ADAT2Q7Z6V5 191 aaKnown RBP12.18□□□□□ -0.46
PRKCB-207ENST00000486868 FAM35AQ86V20 835 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 SCUBE3Q8IX30 993 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 CRIPAKQ8N1N5 446 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 CCDC89Q8N998 374 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 ANKLE1Q8NAG6 615 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 DBF4BQ8NFT6 615 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 IFT81Q8WYA0 676 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 RNF25Q96BH1 459 aaPredicted RBP12.18□□□□□ -0.46
PRKCB-207ENST00000486868 SLC2A13Q96QE2 648 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 RTP3Q9BQQ7 232 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 TMEM175Q9BSA9 504 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 TRIM62Q9BVG3 475 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 OXCT2Q9BYC2 517 aaPredicted RBP12.18□□□□□ -0.46
PRKCB-207ENST00000486868 MRPL9Q9BYD2 267 aaKnown RBP12.18□□□□□ -0.46
PRKCB-207ENST00000486868 FOXP3Q9BZS1 431 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 RNF208Q9H0X6 261 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 LRRC4Q9HBW1 653 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.18□□□□□ -0.46
PRKCB-207ENST00000486868 NEU2Q9Y3R4 380 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 PCDHB7Q9Y5E2 793 aa12.18□□□□□ -0.46
PRKCB-207ENST00000486868 ESYT3A0FGR9 886 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 MYBPHLA2RUH7 354 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 CARNS1A5YM72 827 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 ZSCAN5CA6NGD5 496 aaPredicted RBP12.17□□□□□ -0.46
PRKCB-207ENST00000486868 DCDC2CA8MYV0 355 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 HCRTO43612 131 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 LIASO43766 372 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 ATP2C2O75185 946 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 ITGAVP06756 1048 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 TCF4P15884 667 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 RFC2P35250 354 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 MRPS25P82663 173 aaKnown RBP12.17□□□□□ -0.46
PRKCB-207ENST00000486868 HTRA3P83110 453 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 ELAVL2Q12926 359 aaKnown RBP12.17□□□□□ -0.46
PRKCB-207ENST00000486868 HLTFQ14527 1009 aaKnown RBP eCLIP12.17□□□□□ -0.46
PRKCB-207ENST00000486868 MTFR1Q15390 333 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms