RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 CASTOR2A6NHX0 329 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 C2CD4DB7Z1M9 353 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 C3orf80F5H4A9 247 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 DDX3XO00571 662 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL12A1-208ENST00000486533 PMM2O15305 246 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 TEX28O15482 410 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 EXOC3O60645 756 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 LILRB3O75022 631 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 RECQL4O94761 1208 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 KRT14P02533 472 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 EDN1P05305 212 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 PAEPP09466 180 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 ATP5DP30049 168 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 ATP1A2P50993 1020 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 CASP5P51878 434 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 PEX3P56589 373 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 DR1Q01658 176 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 ADCY2Q08462 1091 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 BFSP1Q12934 665 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 DMP1Q13316 513 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-208ENST00000486533 TUSC3Q13454 348 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 DRAP1Q14919 205 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-208ENST00000486533 SLMAPQ14BN4 828 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 DCAF4L1Q3SXM0 396 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 ATF7IP2Q5U623 682 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 ICE2Q659A1 982 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 DPY19L2P1Q6NXN4 242 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 PPP1R2P3Q6NXS1 205 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 FUT10Q6P4F1 479 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 ELMSAN1Q6PJG2 1045 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 CCDC121Q6ZUS5 278 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 C1orf186Q6ZWK4 172 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 SLC30A5Q8TAD4 765 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 HASPINQ8TF76 798 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 ZNF473Q8WTR7 871 aaKnown RBP9.53□□□□□ -0.88
COL12A1-208ENST00000486533 CENPTQ96BT3 561 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 MFSD14AQ96MC6 490 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 TACO1Q9BSH4 297 aaKnown RBP9.53□□□□□ -0.88
COL12A1-208ENST00000486533 RUSC1Q9BVN2 902 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 CENPHQ9H3R5 247 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 MAN1C1Q9NR34 630 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 ADAM28Q9UKQ2 775 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 PACSIN2Q9UNF0 486 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-208ENST00000486533 ZNF318Q5VUA4 2279 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 MYO10Q9HD67 2058 aa9.53□□□□□ -0.88
COL12A1-208ENST00000486533 PLXNA3P51805 1871 aa9.52□□□□□ -0.88
COL12A1-208ENST00000486533 ESYT3A0FGR9 886 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 GMNCA6NCL1 334 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 TMEM221A6NGB7 291 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 E7EVH7 732 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 K7ERI5 159 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 M0R296 226 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 PTGESO14684 152 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 CLIC2O15247 247 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 TGFB1I1O43294 461 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 HIP1RO75146 1068 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 PHF2O75151 1096 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 TADA2AO75478 443 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 GLUD1P00367 558 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 THP07101 528 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 FAM153BP0C7A2 387 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 NPTX2P47972 431 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 DSG1Q02413 1049 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 ENPEPQ07075 957 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 USP41Q3LFD5 358 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 KRT71Q3SY84 523 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 FAM153CQ494X1 144 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 KIAA0319Q5VV43 1072 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 NAA35Q5VZE5 725 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 EEF1DP3Q658K8 133 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 DENND2CQ68D51 928 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 KCTD16Q68DU8 428 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 ZNF720Q7Z2F6 126 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 TMC3Q7Z5M5 1100 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 APBB1IPQ7Z5R6 666 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-208ENST00000486533 GLYCTKQ8IVS8 523 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 RNF168Q8IYW5 571 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-208ENST00000486533 ANKS4BQ8N8V4 417 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 TDRD5Q8NAT2 981 aaKnown RBP9.52□□□□□ -0.89
COL12A1-208ENST00000486533 MYCBPAPQ8TBZ2 947 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 PBXIP1Q96AQ6 731 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 TRIM11Q96F44 468 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 BORCS6Q96GS4 357 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 AGPAT1Q99943 283 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 PAAF1Q9BRP4 392 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 GPR62Q9BZJ7 368 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 KMT5AQ9NQR1 393 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 AGPAT3Q9NRZ7 376 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 SEPT11Q9NVA2 429 aaKnown RBP9.52□□□□□ -0.89
COL12A1-208ENST00000486533 DMAC2Q9NW81 257 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 FAM153AQ9UHL3 310 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 DPP7Q9UHL4 492 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 SF3B1O75533 1304 aaKnown RBP eCLIP9.52□□□□□ -0.89
COL12A1-208ENST00000486533 C2orf16Q68DN1 1984 aa9.52□□□□□ -0.89
COL12A1-208ENST00000486533 PIEZO1Q92508 2521 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 SMAPO00193 183 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 NDC80O14777 642 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 RTN2O75298 545 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 PPFIA2O75334 1257 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms