RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 FBXO32Q969P5 355 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 CYFIP2Q96F07 1278 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 FAXDC2Q96IV6 333 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 SLITRK1Q96PX8 696 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 SRRTQ9BXP5 876 aaKnown RBP19.52■□□□□ 0.72
COL1A1-206ENST00000485870 GKN1Q9NS71 199 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 GTSE1Q9NYZ3 720 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 KIF26AQ9ULI4 1882 aaPredicted RBP19.52■□□□□ 0.71
COL1A1-206ENST00000485870 ZNF840PA6NDX5 716 aa19.51■□□□□ 0.71
COL1A1-206ENST00000485870 TNFRSF10BO14763 440 aa19.51■□□□□ 0.71
COL1A1-206ENST00000485870 PPP3CCP48454 512 aa19.51■□□□□ 0.71
COL1A1-206ENST00000485870 ANGPT1Q15389 498 aa19.51■□□□□ 0.71
COL1A1-206ENST00000485870 TRIM68Q6AZZ1 485 aa19.51■□□□□ 0.71
COL1A1-206ENST00000485870 JAKMIP2Q96AA8 810 aa19.51■□□□□ 0.71
COL1A1-206ENST00000485870 NELL2Q99435 816 aa19.51■□□□□ 0.71
COL1A1-206ENST00000485870 HNRNPABQ99729 332 aaKnown RBP19.51■□□□□ 0.71
COL1A1-206ENST00000485870 OSBPL6Q9BZF3 934 aa19.51■□□□□ 0.71
COL1A1-206ENST00000485870 DNAI2Q9GZS0 605 aa19.51■□□□□ 0.71
COL1A1-206ENST00000485870 CACNA1IQ9P0X4 2223 aa19.51■□□□□ 0.71
COL1A1-206ENST00000485870 PIEZO1Q92508 2521 aa19.5■□□□□ 0.71
COL1A1-206ENST00000485870 PDE6CP51160 858 aa19.5■□□□□ 0.71
COL1A1-206ENST00000485870 CUL2Q13617 745 aa19.5■□□□□ 0.71
COL1A1-206ENST00000485870 ZNF77Q15935 545 aa19.5■□□□□ 0.71
COL1A1-206ENST00000485870 CC2D1AQ6P1N0 951 aaPredicted RBP19.5■□□□□ 0.71
COL1A1-206ENST00000485870 TTC39CQ8N584 583 aa19.5■□□□□ 0.71
COL1A1-206ENST00000485870 HEXIM2Q96MH2 286 aaKnown RBP19.5■□□□□ 0.71
COL1A1-206ENST00000485870 PHOX2BQ99453 314 aa19.5■□□□□ 0.71
COL1A1-206ENST00000485870 IRF2BPLQ9H1B7 796 aa19.5■□□□□ 0.71
COL1A1-206ENST00000485870 C8orf33Q9H7E9 229 aaPredicted RBP19.5■□□□□ 0.71
COL1A1-206ENST00000485870 CSNK1G1Q9HCP0 422 aa19.5■□□□□ 0.71
COL1A1-206ENST00000485870 LMBRD1Q9NUN5 540 aa19.5■□□□□ 0.71
COL1A1-206ENST00000485870 RWDD2AQ9UIY3 292 aa19.5■□□□□ 0.71
COL1A1-206ENST00000485870 HELZP42694 1942 aaKnown RBP19.5■□□□□ 0.71
COL1A1-206ENST00000485870 SPECC1L-ADORA2AF8WAN1 911 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 GNA14O95837 355 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 RAD23BP54727 409 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 USP4Q13107 963 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 MTF1Q14872 753 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 ITPRIPL2Q3MIP1 535 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 PPP1R26Q5T8A7 1209 aaPredicted RBP19.49■□□□□ 0.71
COL1A1-206ENST00000485870 CLEC20AQ6ZU45 233 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 TRIM59Q8IWR1 403 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 SLC4A11Q8NBS3 891 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 PDZD8Q8NEN9 1154 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 SH3RF2Q8TEC5 729 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 TMEM176AQ96HP8 235 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 FAM83CQ9BQN1 747 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 NUP62CLQ9H1M0 184 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 EBF3Q9H4W6 596 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 GMIPQ9P107 970 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 CHORDC1Q9UHD1 332 aaPredicted RBP19.49■□□□□ 0.71
COL1A1-206ENST00000485870 ARHGAP26Q9UNA1 814 aa19.49■□□□□ 0.71
COL1A1-206ENST00000485870 PATJQ8NI35 1801 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 NCAM2O15394 837 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 FGFR1OPO95684 399 aaKnown RBP19.48■□□□□ 0.71
COL1A1-206ENST00000485870 OAS1P00973 400 aaKnown RBP19.48■□□□□ 0.71
COL1A1-206ENST00000485870 ARSAP15289 507 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 PFKLP17858 780 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 CTHP32929 405 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 TXNDC11Q6PKC3 985 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 GPRIN1Q7Z2K8 1008 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 ZNF687Q8N1G0 1237 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 OVCA2Q8WZ82 227 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 CLDN23Q96B33 292 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 MSANTD3Q96H12 275 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 IPO9Q96P70 1041 aaKnown RBP19.48■□□□□ 0.71
COL1A1-206ENST00000485870 GBP4Q96PP9 640 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 RNF38Q9H0F5 515 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 HPS4Q9NQG7 708 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 SPATA6Q9NWH7 488 aaPredicted RBP19.48■□□□□ 0.71
COL1A1-206ENST00000485870 IL37Q9NZH6 218 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.48■□□□□ 0.71
COL1A1-206ENST00000485870 MYO16Q9Y6X6 1858 aa19.48■□□□□ 0.71
COL1A1-206ENST00000485870 PMM2O15305 246 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 CCDC192P0DO97 292 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 MLLT6P55198 1093 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-206ENST00000485870 MARSP56192 900 aaKnown RBP19.47■□□□□ 0.71
COL1A1-206ENST00000485870 YWHAEP62258 255 aaKnown RBP19.47■□□□□ 0.71
COL1A1-206ENST00000485870 CETN1Q12798 172 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 KCNH2Q12809 1159 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 FZD5Q13467 585 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 RUNX3Q13761 415 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 RALGPS2Q86X27 583 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-206ENST00000485870 CREBRFQ8IUR6 639 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 C1orf210Q8IVY1 113 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 MLKLQ8NB16 471 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 NT5C1BQ96P26 610 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 MED15Q96RN5 788 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 FBXO44Q9H4M3 255 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 FAM124BQ9H5Z6 455 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-206ENST00000485870 COMMD8Q9NX08 183 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 DUS2Q9NX74 493 aaKnown RBP19.47■□□□□ 0.71
COL1A1-206ENST00000485870 SMPD4Q9NXE4 827 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 CPQQ9Y646 472 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 WNT6Q9Y6F9 365 aa19.47■□□□□ 0.71
COL1A1-206ENST00000485870 OTOL1A6NHN0 477 aaPredicted RBP19.46■□□□□ 0.71
COL1A1-206ENST00000485870 HHLA1C9JL84 531 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 LEFTY2O00292 366 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 P4HA2O15460 535 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 OLFM2O95897 454 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms