RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 RNF38Q9H0F5 515 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 ARRDC1-AS1Q9H2J1 176 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 CHORDC1Q9UHD1 332 aaPredicted RBP14.63□□□□□ -0.07
SCAF4-206ENST00000485790 FRMD4BQ9Y2L6 1034 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 MIA3Q5JRA6 1907 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 PDXKO00764 312 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 IKBKBO14920 756 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 ADH1CP00326 375 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 MBL2P11226 248 aaPredicted RBP14.62□□□□□ -0.07
SCAF4-206ENST00000485790 CMA1P23946 247 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 CASP1P29466 404 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 RAP1GAPP47736 663 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 CLDN10P78369 228 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 DMC1Q14565 340 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 PKN3Q6P5Z2 889 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 SLC9A9Q8IVB4 645 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 TSTD1Q8NFU3 115 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 PARD3BQ8TEW8 1205 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 TMEM174Q8WUU8 243 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 TAF4BQ92750 862 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 PAGE5Q96GU1 130 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 PNKPQ96T60 521 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 NACA2Q9H009 215 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 XYLT2Q9H1B5 865 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 VRTNQ9H8Y1 702 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 SERTAD1Q9UHV2 236 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 CPQQ9Y646 472 aa14.62□□□□□ -0.07
SCAF4-206ENST00000485790 CALUO43852 315 aaPredicted RBP14.61□□□□□ -0.07
SCAF4-206ENST00000485790 ALDH1A2O94788 518 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 DGKEP52429 567 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 CDH8P55286 799 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 MRPS21P82921 87 aaKnown RBP14.61□□□□□ -0.07
SCAF4-206ENST00000485790 DNM1Q05193 864 aaKnown RBP14.61□□□□□ -0.07
SCAF4-206ENST00000485790 IFRD2Q12894 506 aaPredicted RBP14.61□□□□□ -0.07
SCAF4-206ENST00000485790 STK4Q13043 487 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 DHCR24Q15392 516 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 C2orf27AQ580R0 203 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 HECTD3Q5T447 861 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 BTBD8Q5XKL5 378 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 FILIP1Q7Z7B0 1213 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 KBTBD6Q86V97 674 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 RIN3Q8TB24 985 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 FBXO32Q969P5 355 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 OTUB2Q96DC9 234 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 ZNF518BQ9C0D4 1074 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 DPEP3Q9H4B8 488 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 VPS45Q9NRW7 570 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 DMAC2Q9NW81 257 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 SMPD4Q9NXE4 827 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 CFAP97Q9P2B7 532 aa14.61□□□□□ -0.07
SCAF4-206ENST00000485790 E2F8A0AVK6 867 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-206ENST00000485790 EPN2O95208 641 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 C4BPAP04003 597 aaKnown RBP14.6□□□□□ -0.07
SCAF4-206ENST00000485790 RPL13P26373 211 aaKnown RBP14.6□□□□□ -0.07
SCAF4-206ENST00000485790 UNC93AQ86WB7 457 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 SPRYD3Q8NCJ5 442 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 CCDC150Q8NCX0 1101 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 TMC2Q8TDI7 906 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 SMARCD1Q96GM5 515 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 CCDC34Q96HJ3 373 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 SPATA32Q96LK8 384 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 HHIPQ96QV1 700 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 KCNK16Q96T55 309 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 FBXO44Q9H4M3 255 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 DMAP1Q9NPF5 467 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-206ENST00000485790 SH3BP1Q9Y3L3 701 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 ATP6V1DQ9Y5K8 247 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 PDCD11Q14690 1871 aaKnown RBP14.6□□□□□ -0.07
SCAF4-206ENST00000485790 DCHS1Q96JQ0 3298 aa14.6□□□□□ -0.07
SCAF4-206ENST00000485790 CEP250Q9BV73 2442 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 LRRIQ3A6PVS8 624 aaPredicted RBP14.59□□□□□ -0.07
SCAF4-206ENST00000485790 K7EQS6 105 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 CLDN5O00501 218 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 ZBTB24O43167 697 aaPredicted RBP14.59□□□□□ -0.07
SCAF4-206ENST00000485790 OLFM2O95897 454 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 OAS1P00973 400 aaKnown RBP14.59□□□□□ -0.07
SCAF4-206ENST00000485790 NR3C1P04150 777 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 APODP05090 189 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 GBP1P32455 592 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 EIF2DP41214 584 aaKnown RBP14.59□□□□□ -0.07
SCAF4-206ENST00000485790 GRIA2P42262 883 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 TNFRSF4P43489 277 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 CASP4P49662 377 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 LIMK1P53667 647 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 GAD2Q05329 585 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 BYSLQ13895 437 aaKnown RBP14.59□□□□□ -0.07
SCAF4-206ENST00000485790 PLK5Q496M5 336 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 KMT5BQ4FZB7 885 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 HSF5Q4G112 596 aaPredicted RBP14.59□□□□□ -0.07
SCAF4-206ENST00000485790 PPM1JQ5JR12 505 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 SNX30Q5VWJ9 437 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 CEP135Q66GS9 1140 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 RHBDF2Q6PJF5 856 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 GRAMD1CQ8IYS0 662 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 CRYBG2Q8N1P7 616 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 USP33Q8TEY7 942 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 IMPG2Q9BZV3 1241 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 SCN1AP35498 2009 aa14.59□□□□□ -0.07
SCAF4-206ENST00000485790 A0A0A0MRY4 1105 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms