RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 CDH9Q9ULB4 789 aa5.67□□□□□ -1.5
CNTN4-216ENST00000484686 TFR2Q9UP52 801 aa5.67□□□□□ -1.5
CNTN4-216ENST00000484686 NLRC5Q86WI3 1866 aa5.67□□□□□ -1.5
CNTN4-216ENST00000484686 DOCK6Q96HP0 2047 aa5.67□□□□□ -1.5
CNTN4-216ENST00000484686 MTMR11A4FU01 709 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 H3BQ06 376 aaPredicted RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 TBC1D4O60343 1298 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 VNN2O95498 520 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 GLUD1P00367 558 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ATF2P15336 505 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 NDUFV1P49821 464 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 GFPT1Q06210 699 aaPredicted RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 TBX2Q13207 712 aaPredicted RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 GPR17Q13304 367 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ASIC2Q16515 512 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 DENND1BQ6P3S1 775 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 PDXDC1Q6P996 788 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ZNF571Q7Z3V5 609 aaPredicted RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 UNC93AQ86WB7 457 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 SCUBE3Q8IX30 993 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 IQCF2Q8IXL9 164 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 CRYBG2Q8N1P7 616 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 UBR7Q8N806 425 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 SAMD11Q96NU1 681 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 HERC2P3Q9BVR0 1158 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 MIS12Q9H081 205 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ZCWPW1Q9H0M4 648 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 MAN1C1Q9NR34 630 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 SPTLC3Q9NUV7 552 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 TAS2R14Q9NYV8 317 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ARHGAP20Q9P2F6 1191 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ITIH6Q6UXX5 1313 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ARHGEF37A1IGU5 675 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 SOWAHDA6NJG2 315 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 O00370 1275 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 CCL16O15467 120 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 MICAL2O94851 1124 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ZRANB2O95218 330 aaKnown RBP eCLIP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 C8AP07357 584 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 LCP1P13796 627 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 CLCN4P51793 760 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 YWHAEP62258 255 aaKnown RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 UBE3AQ05086 875 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 USP4Q13107 963 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 PTPROQ16827 1216 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 PMF1Q6P1K2 205 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 FAM171BQ6P995 826 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 TMEM110Q86TL2 294 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 FAM35AQ86V20 835 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 DCP1BQ8IZD4 617 aaKnown RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 KREMEN2Q8NCW0 462 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 C1orf131Q8NDD1 294 aaKnown RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 VN1R2Q8NFZ6 395 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 GAS2L1Q99501 681 aaPredicted RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ZNHIT6Q9NWK9 470 aaKnown RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 HCFC1R1Q9NWW0 138 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 CLDND1Q9NY35 253 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 LMCD1Q9NZU5 365 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 CYTH4Q9UIA0 394 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 LZTS1Q9Y250 596 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 MTCH2Q9Y6C9 303 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 MYH10P35580 1976 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 EME2A4GXA9 379 aaPredicted RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 OR6C75A6NL08 312 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 CLASP2O75122 1294 aaKnown RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 GRAP2O75791 330 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 FOSL2P15408 326 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 GJA1P17302 382 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ABCB4P21439 1286 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 EIF4A3P38919 411 aaKnown RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 RPS6KA3P51812 740 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ZNF132P52740 706 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 RNASE9P60153 205 aaKnown RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 TWF1Q12792 350 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 HYAL1Q12794 435 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 FIGNQ5HY92 759 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 CYP4A22Q5TCH4 519 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 NAA35Q5VZE5 725 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 HGSNATQ68CP4 663 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 CLEC20AQ6ZU45 233 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 GPRIN1Q7Z2K8 1008 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 CNGA4Q8IV77 575 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 KRT222Q8N1A0 295 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 CACTIN-AS1Q8N1I8 211 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 WDTC1Q8N5D0 677 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 DDX1Q92499 740 aaKnown RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 ANKRD7Q92527 254 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 TRIM11Q96F44 468 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 PCDHB18PQ96TA0 734 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 PKMYT1Q99640 499 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 SMOQ99835 787 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 HESX1Q9UBX0 185 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 NOCTQ9UK39 431 aaKnown RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 NUDT5Q9UKK9 219 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 PCDHB5Q9Y5E4 795 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 BACE2Q9Y5Z0 518 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 IRAK3Q9Y616 596 aa5.66□□□□□ -1.5
CNTN4-216ENST00000484686 V9GYY5 206 aaPredicted RBP5.66□□□□□ -1.5
CNTN4-216ENST00000484686 VPS13AQ96RL7 3174 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms