RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 NT5C3AQ9H0P0 336 aa4.78□□□□□ -1.64
SPTA1-206ENST00000484520 ACAD9Q9H845 621 aa4.78□□□□□ -1.64
SPTA1-206ENST00000484520 GJB4Q9NTQ9 266 aa4.78□□□□□ -1.64
SPTA1-206ENST00000484520 DDX25Q9UHL0 483 aaKnown RBP4.78□□□□□ -1.64
SPTA1-206ENST00000484520 AGTPBP1Q9UPW5 1226 aa4.78□□□□□ -1.64
SPTA1-206ENST00000484520 PCDHB6Q9Y5E3 794 aa4.78□□□□□ -1.64
SPTA1-206ENST00000484520 SIPA1L1O43166 1804 aa4.78□□□□□ -1.64
SPTA1-206ENST00000484520 PASKQ96RG2 1323 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 SYCE3A1L190 88 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 FSD2A1L4K1 749 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 VWA3AA6NCI4 1184 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 RASSF10A6NK89 507 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 UBE2Q2LH0YL09 131 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 ARVCFO00192 962 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 KLF4O43474 513 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 DKC1O60832 514 aaKnown RBP eCLIP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 NUDT3O95989 172 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 ATP2B1P20020 1258 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 MARCKSP29966 332 aaPredicted RBP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 PTGS2P35354 604 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 GCLCP48506 637 aaPredicted RBP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 RGS19P49795 217 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 DNM2P50570 870 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 NDUFA8P51970 172 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 LBX1P52954 281 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 HMGCS2P54868 508 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 ZNF174Q15697 407 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 USH1GQ495M9 461 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 CEP55Q53EZ4 464 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 JAKMIP3Q5VZ66 844 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 MBNL2Q5VZF2 373 aaKnown RBP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 SHC4Q6S5L8 630 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 KRBA2Q6ZNG9 492 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 ZNF662Q6ZS27 426 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 MAMDC2Q7Z304 686 aaPredicted RBP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 GSPT2Q8IYD1 628 aaKnown RBP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 BCL6BQ8N143 479 aaPredicted RBP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 IGSF22Q8N9C0 903 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 RDM1Q8NG50 284 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 NSUN6Q8TEA1 469 aaKnown RBP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 CRYGNQ8WXF5 182 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 ASB15Q8WXK1 588 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 HAS1Q92839 578 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 PTPRN2Q92932 1015 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 COA7Q96BR5 231 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 OPTNQ96CV9 577 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 ABHD8Q96I13 439 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 CDK5RAP3Q96JB5 506 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 GSDMAQ96QA5 445 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 MTMR9Q96QG7 549 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 IWS1Q96ST2 819 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 PARK7Q99497 189 aaKnown RBP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 RIT2Q99578 217 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 BPIFA3Q9BQP9 254 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 FTOQ9C0B1 505 aaKnown RBP eCLIP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 CPVLQ9H3G5 476 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 MROH8Q9H579 483 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 GBA2Q9HCG7 927 aaPredicted RBP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 ADD3Q9UEY8 706 aaKnown RBP4.77□□□□□ -1.65
SPTA1-206ENST00000484520 PAPPA2Q9BXP8 1791 aa4.77□□□□□ -1.65
SPTA1-206ENST00000484520 RPTORQ8N122 1335 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 A0A1B0GVL5 298 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 CCDC66A2RUB6 948 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 MANSC4A6NHS7 340 aaPredicted RBP4.76□□□□□ -1.65
SPTA1-206ENST00000484520 SCDO00767 359 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 GSTA4O15217 222 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 POLR2DO15514 142 aaKnown RBP4.76□□□□□ -1.65
SPTA1-206ENST00000484520 FAM20BO75063 409 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 KIF20AO95235 890 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 CFBP00751 764 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 ALAS1P13196 640 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 FBLP22087 321 aaKnown RBP4.76□□□□□ -1.65
SPTA1-206ENST00000484520 SCP2P22307 547 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 CCND2P30279 289 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 SFNP31947 248 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 STAT6P42226 847 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 STIM1Q13586 685 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 DOCK1Q14185 1865 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 POSTNQ15063 836 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 SHROOM1Q2M3G4 852 aaPredicted RBP4.76□□□□□ -1.65
SPTA1-206ENST00000484520 KIAA1755Q5JYT7 1200 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 RRAGBQ5VZM2 374 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 SNRNP48Q6IEG0 339 aaKnown RBP4.76□□□□□ -1.65
SPTA1-206ENST00000484520 CNNM4Q6P4Q7 775 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 CCDC174Q6PII3 467 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 KCNV1Q6PIU1 500 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 RASGRP2Q7LDG7 609 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 ANKRD23Q86SG2 305 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 ABRAQ8N0Z2 381 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 C4orf32Q8N8J7 132 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 MLKLQ8NB16 471 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 HIPK4Q8NE63 616 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 REPS2Q8NFH8 660 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 SMARCE1Q969G3 411 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 NAF1Q96HR8 494 aaKnown RBP4.76□□□□□ -1.65
SPTA1-206ENST00000484520 RPL10LQ96L21 214 aaKnown RBP4.76□□□□□ -1.65
SPTA1-206ENST00000484520 GLIS2Q9BZE0 524 aaPredicted RBP4.76□□□□□ -1.65
SPTA1-206ENST00000484520 GRPEL1Q9HAV7 217 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 KCNMB3Q9NPA1 279 aa4.76□□□□□ -1.65
SPTA1-206ENST00000484520 RNF146Q9NTX7 359 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms